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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6870 and GFF6871 are separated by 3 nucleotides
GFF6871 and GFF6872 are separated by 2 nucleotides
GFF6872 and GFF6873 are separated by 28 nucleotides
GFF6873 and GFF6874 are separated by 22 nucleotides
GFF6870 - FIG00904791: hypothetical protein, at 1,961 to 2,923
GFF6870
GFF6871 - FIG00905613: hypothetical protein, at 2,927 to 3,889
GFF6871
GFF6872 - FIG00904907: hypothetical protein, at 3,892 to 4,590
GFF6872
GFF6873 - Aminotransferase, DegT/DnrJ/EryC1/StrS family, at 4,619 to 5,725
GFF6873
GFF6874 - hypothetical protein, at 5,748 to 7,466
GFF6874
Group
Condition
GFF6870
GFF6871
GFF6872
GFF6873
GFF6874
complex community
Community=Kojac gum; Passage=4
-2.4
-1.8
-2.2
+0.8
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.9
-0.8
-1.2
-0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.9
-0.9
-0.8
-0.0
+0.1
complex community
Community=Locust bean gum; Passage=4
-1.0
-0.9
-0.5
+0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.5
-0.6
-0.9
-0.2
-0.0
complex community
Community=guar; Passage=4
-0.9
-0.8
-0.8
+0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.7
-0.6
-0.6
-0.1
-0.1
complex community
Community=guar; Passage=4
-1.0
-0.8
-0.1
+0.0
-0.1
complex community
Community=arabino-guar; Passage=4
-0.9
-0.3
-0.7
+0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.5
-0.5
-0.5
+0.0
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.6
-0.6
-0.3
-0.0
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.4
-0.5
-0.7
-0.0
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.5
-0.5
-0.5
-0.1
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.6
-0.4
-0.5
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
-0.5
-0.4
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
-0.4
-0.4
-0.1
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.3
-0.5
-0.4
-0.1
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.3
-0.6
-0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.6
-0.3
-0.1
-0.0
complex community
Community=Locust bean gum; Passage=4
-0.7
-0.6
-0.1
+0.0
+0.1
complex community
Community=guar; Passage=4
-0.4
-0.5
-0.3
+0.1
-0.2
complex community
Community=arabino-guar; Passage=4
-0.7
-0.3
-0.3
+0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.3
-0.5
-0.3
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.4
-0.4
-0.2
-0.1
-0.1
complex community
Community=arabino-guar; Passage=4
-0.6
-0.4
-0.3
+0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.3
-0.5
-0.1
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.3
-0.3
-0.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.3
-0.2
-0.2
-0.0
complex community
Community=guar; Passage=4
-0.6
-0.3
-0.2
+0.1
+0.0
complex community
Community=arabino-guar; Passage=4
-0.3
-0.5
+0.0
+0.3
+0.1
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