Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6851 and GFF6852 are separated by 75 nucleotidesGFF6852 and GFF6853 are separated by 157 nucleotidesGFF6853 and GFF6854 are separated by 22 nucleotidesGFF6854 and GFF6855 are separated by 12 nucleotides GFF6851 - no description, at 34,595 to 34,741 GFF6851 GFF6852 - Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system, at 34,817 to 48,493 GFF6852 GFF6853 - Putative transmembrane sensor, at 48,651 to 49,604 GFF6853 GFF6854 - RNA polymerase ECF-type sigma factor, at 49,627 to 50,187 GFF6854 GFF6855 - hypothetical protein, at 50,200 to 50,880 GFF6855
Group Condition GFF6851 GFF6852 GFF6853 GFF6854 GFF6855
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.0 -0.5 -0.4 -0.4
complex community Community=Locust bean gum; Passage=4 +0.1 +0.0 -1.0 -0.3 +0.0
complex community Community=guar; Passage=4 -0.1 +0.0 -0.5 -1.2 +0.7
complex community Community=guar; Passage=4 -0.4 +0.0 -0.4 -0.4 +0.2
phage phage_bap4 -0.4 +0.0 -0.5 -0.2 -0.0
complex community Community=guar; Passage=4 -1.2 +0.1 -0.1 +0.1 +0.2
no phage control no phage control -0.3 +0.0 +0.3 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.0 -0.8 -0.1 +0.7
complex community Community=arabino-guar; Passage=4 -0.6 +0.1 +1.0 -1.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.4 -0.6 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.0 -0.5 -0.4 +0.1
complex community Community=Kojac gum; Passage=4 +0.0 -0.1 -0.6 -0.1 +0.7
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -0.7 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.5 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 +0.4 -0.4 +0.1
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.6 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 +0.0 +1.1 -0.3 -0.1
phage phage_bap4 -0.1 +0.1 +0.6 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 +1.0 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 +0.2 -0.3 +0.4
complex community Community=Locust bean gum; Passage=4 +0.2 -0.0 +0.4 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 +0.6 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 +0.9 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.7 -0.3 +0.3
complex community Community=guar; Passage=4 +0.2 -0.1 -0.2 -0.1 +0.9
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.0 +0.5 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.7 -0.0 +0.2
complex community Community=Kojac gum; Passage=1 +0.4 +0.1 +0.1 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.6 -0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 +0.5 +0.3 +0.5
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