Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6845 and GFF6846 are separated by 10 nucleotidesGFF6846 and GFF6847 overlap by 4 nucleotidesGFF6847 and GFF6848 are separated by 10 nucleotidesGFF6848 and GFF6849 are separated by 12 nucleotides GFF6845 - ATPase involved in DNA repair, at 27,270 to 27,992 GFF6845 GFF6846 - Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid, at 28,003 to 29,865 GFF6846 GFF6847 - Ferric siderophore transport system, periplasmic binding protein TonB, at 29,862 to 30,599 GFF6847 GFF6848 - Biopolymer transport protein ExbD/TolR, at 30,610 to 31,023 GFF6848 GFF6849 - MotA/TolQ/ExbB proton channel family protein, at 31,036 to 32,844 GFF6849
Group Condition GFF6845 GFF6846 GFF6847 GFF6848 GFF6849
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.4 -1.2 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 -0.5 -0.3 -0.2
complex community Community=guar; Passage=4 +0.0 +0.0 -0.2 -0.6 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 -0.1 +0.1 -0.8 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.5 -0.1 -0.4 +0.3 +0.0
complex community Community=guar; Passage=4 +0.5 +0.2 +0.3 -1.4 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 +0.2 -0.2 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 -0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.1 +0.2 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.4 +0.1 -0.0
phage phage_bap4 +0.0 +0.1 +0.2 -0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 +0.2 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.4 -0.4 -0.1
complex community Community=guar; Passage=4 +0.3 -0.1 -0.0 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.3 -0.3 +0.0
complex community Community=Kojac gum; Passage=4 +0.5 -0.2 -0.1 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 +0.3 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 +0.2 -0.5 +0.0
complex community Community=arabino-guar; Passage=4 +0.4 -0.2 -0.3 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.4 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.0 +0.6 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 +0.6 +0.2 +0.0 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.0 +0.6 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.1 +0.3 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.1 +0.2 -0.1 -0.0
phage phage_bap4 +0.2 +0.2 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.5 +0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.2 +0.2 +0.3 +0.7 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.3 +0.4 +0.0
complex community Community=guar; Passage=4 +0.6 -0.2 +0.8 -0.1 +0.0
remove
GFF6845
plot		 remove
GFF6846
plot		 remove
GFF6847		 remove
GFF6848
plot		 remove
GFF6849
plot