Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6840 and GFF6841 are separated by 74 nucleotidesGFF6841 and GFF6842 are separated by 18 nucleotidesGFF6842 and GFF6843 are separated by 8 nucleotidesGFF6843 and GFF6844 are separated by 29 nucleotides GFF6840 - Putative transmembrane protein, at 24,244 to 24,915 GFF6840 GFF6841 - hypothetical protein, at 24,990 to 25,487 GFF6841 GFF6842 - no description, at 25,506 to 25,760 GFF6842 GFF6843 - FIG00958542: hypothetical protein, at 25,769 to 26,329 GFF6843 GFF6844 - Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system, at 26,359 to 27,273 GFF6844
Group Condition GFF6840 GFF6841 GFF6842 GFF6843 GFF6844
complex community Community=arabino-guar; Passage=4 -0.3 -0.4 N.D. -1.1 +0.5
phage phage_bap4 -0.1 -0.5 N.D. -0.5 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -1.1 N.D. -0.4 +0.3
phage phage_bap4 +0.1 -0.4 N.D. -0.5 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -1.1 N.D. +0.1 +0.2
complex community Community=guar; Passage=4 -0.3 -0.2 N.D. +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.4 N.D. -0.3 -0.1
no phage control no phage control -0.1 -0.2 N.D. -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.4 N.D. +0.0 +0.1
no phage control no phage control +0.1 +0.2 N.D. -0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 N.D. +0.2 -0.1
phage phage_bap4 +0.1 +0.2 N.D. -0.4 -0.1
phage phage_bap4 +0.1 -0.3 N.D. -0.1 +0.1
phage phage_bap4 +0.3 -0.1 N.D. -0.3 -0.1
complex community Community=Locust bean gum; Passage=1 -0.3 -0.1 N.D. +0.2 +0.1
no phage control no phage control +0.2 -0.3 N.D. -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.2 N.D. -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 N.D. -0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 N.D. +0.2 -0.2
complex community Community=Kojac gum; Passage=1 -0.2 +0.5 N.D. -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.3 N.D. +0.4 -0.3
complex community Community=guar; Passage=4 -0.2 +0.5 N.D. +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.4 N.D. +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 N.D. +0.1 -0.2
complex community Community=guar; Passage=4 +0.3 -0.2 N.D. +0.1 +0.3
complex community Community=guar; Passage=4 -0.3 +1.3 N.D. +0.1 -0.3
complex community Community=Kojac gum; Passage=4 -0.3 +1.3 N.D. +0.3 -0.0
complex community Community=arabino-guar; Passage=4 +0.5 +0.8 N.D. +0.2 -0.0
complex community Community=arabino-guar; Passage=4 +0.3 +0.8 N.D. +0.2 +0.3
complex community Community=Locust bean gum; Passage=4 +0.5 +0.8 N.D. +0.3 +0.2
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