Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6824 and GFF6825 overlap by 8 nucleotidesGFF6825 and GFF6826 are separated by 67 nucleotidesGFF6826 and GFF6827 are separated by 33 nucleotidesGFF6827 and GFF6828 are separated by 85 nucleotides GFF6824 - Pyruvate:Oxaloacetate transcarboxylase domain protein, at 9,536 to 10,480 GFF6824 GFF6825 - CaiB/BaiF family protein, at 10,473 to 11,699 GFF6825 GFF6826 - Transcriptional regulator, LysR family, at 11,767 to 12,666 GFF6826 GFF6827 - Glutamine amidotransferase, class I, at 12,700 to 13,440 GFF6827 GFF6828 - CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8), at 13,526 to 14,164 GFF6828
Group Condition GFF6824 GFF6825 GFF6826 GFF6827 GFF6828
complex community Community=arabino-guar; Passage=4 -1.9 +0.0 N.D. -0.7 -0.6
complex community Community=arabino-guar; Passage=4 -0.9 -1.1 N.D. -0.9 -0.1
complex community Community=Kojac gum; Passage=1 -0.3 -0.2 N.D. -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 N.D. -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.2 N.D. -0.1 -0.0
complex community Community=guar; Passage=4 +0.2 +0.1 N.D. -0.4 -0.1
phage phage_bap4 +0.2 +0.3 N.D. -0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.0 N.D. -0.0 +0.3
complex community Community=arabino-guar; Passage=4 +0.9 -0.4 N.D. -0.6 -0.1
phage phage_bap4 +0.2 -0.5 N.D. +0.1 +0.1
complex community Community=guar; Passage=4 +0.4 -1.0 N.D. +0.8 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 N.D. +0.4 -0.2
phage phage_bap4 +0.3 -0.2 N.D. -0.3 +0.1
complex community Community=guar; Passage=4 -0.1 -0.5 N.D. +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.4 N.D. -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 N.D. -0.6 +0.3
complex community Community=guar; Passage=4 +0.4 -0.7 N.D. +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 N.D. -0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.3 -0.0 N.D. -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 +0.3 N.D. -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 N.D. +0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 N.D. +0.4 -0.2
phage phage_bap4 +0.5 +0.2 N.D. -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.4 N.D. +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.3 N.D. +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.5 N.D. +0.2 -0.1
phage phage_bap4 +0.3 +0.2 N.D. +0.2 +0.1
phage phage_bap4 +0.2 +0.4 N.D. +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.0 N.D. +0.9 -0.0
complex community Community=Kojac gum; Passage=4 -0.2 +0.6 N.D. +0.4 +0.4
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