Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6783 and GFF6784 are separated by 40 nucleotidesGFF6784 and GFF6785 are separated by 24 nucleotidesGFF6785 and GFF6786 are separated by 35 nucleotidesGFF6786 and GFF6787 are separated by 13 nucleotides GFF6783 - endo-type 6-aminohexanoate oligomer hydrolase, at 32,947 to 33,975 GFF6783 GFF6784 - D-amino acid dehydrogenase (EC 1.4.99.6), at 34,016 to 35,311 GFF6784 GFF6785 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 35,336 to 35,626 GFF6785 GFF6786 - CopG protein, at 35,662 to 36,123 GFF6786 GFF6787 - Copper tolerance protein, at 36,137 to 36,661 GFF6787
Group Condition GFF6783 GFF6784 GFF6785 GFF6786 GFF6787
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 N.D. -2.9 -2.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.8 N.D. -1.1 -2.8
complex community Community=arabino-guar; Passage=4 N.D. +0.6 N.D. +1.1 -4.1
complex community Community=arabino-guar; Passage=4 N.D. +0.0 N.D. -1.7 -0.6
phage phage_bap4 N.D. -0.2 N.D. +0.0 -1.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 N.D. +0.4 -2.1
phage phage_bap4 N.D. -0.3 N.D. -0.2 -1.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 N.D. +0.3 -1.7
complex community Community=guar; Passage=4 N.D. -0.3 N.D. -0.5 -0.6
complex community Community=Kojac gum; Passage=4 N.D. -1.2 N.D. +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.8 N.D. +1.0 -1.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 N.D. -0.6 -0.3
phage phage_bap4 N.D. -0.2 N.D. +0.5 -1.4
no phage control no phage control N.D. -0.1 N.D. +0.2 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.3 N.D. -0.8 -0.5
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 N.D. +0.4 -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 N.D. +0.1 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 N.D. +0.3 -1.1
complex community Community=Kojac gum; Passage=1 N.D. -0.0 N.D. +0.7 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.0 N.D. -0.6 +0.7
complex community Community=arabino-guar; Passage=4 N.D. -0.1 N.D. +1.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 N.D. -0.4 +1.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.3 N.D. +0.0 +1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 N.D. +0.4 +0.6
complex community Community=guar; Passage=4 N.D. -0.2 N.D. +0.9 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 N.D. -0.2 +1.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 N.D. +0.1 +1.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 N.D. +0.6 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 N.D. +0.4 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.4 N.D. +0.6 +0.5
remove
GFF6783
plot		 remove
GFF6784
plot		 remove
GFF6785		 remove
GFF6786
plot		 remove
GFF6787
plot