Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6781 and GFF6782 overlap by 11 nucleotidesGFF6782 and GFF6783 are separated by 21 nucleotidesGFF6783 and GFF6784 are separated by 40 nucleotidesGFF6784 and GFF6785 are separated by 24 nucleotides GFF6781 - Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38), at 29,769 to 31,556 GFF6781 GFF6782 - TRAP transporter solute receptor, TAXI family precursor, at 31,546 to 32,925 GFF6782 GFF6783 - endo-type 6-aminohexanoate oligomer hydrolase, at 32,947 to 33,975 GFF6783 GFF6784 - D-amino acid dehydrogenase (EC 1.4.99.6), at 34,016 to 35,311 GFF6784 GFF6785 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 35,336 to 35,626 GFF6785
Group Condition GFF6781 GFF6782 GFF6783 GFF6784 GFF6785
complex community Community=Locust bean gum; Passage=4 -0.7 -0.6 N.D. -0.8 N.D.
complex community Community=guar; Passage=4 -0.3 -0.9 N.D. -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -0.9 N.D. -0.5 N.D.
complex community Community=arabino-guar; Passage=4 -0.7 -0.6 N.D. -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.8 N.D. -0.5 N.D.
complex community Community=Kojac gum; Passage=4 +0.5 -0.1 N.D. -1.2 N.D.
phage phage_bap4 -0.3 +0.1 N.D. -0.5 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 +0.0 N.D. -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.4 N.D. -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 -0.5 N.D. -0.1 N.D.
complex community Community=guar; Passage=4 -0.3 +0.0 N.D. -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.1 N.D. -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -0.1 N.D. +0.2 N.D.
phage phage_bap4 +0.1 -0.4 N.D. -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.2 N.D. -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.0 N.D. +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.2 N.D. -0.1 N.D.
no phage control no phage control +0.1 +0.2 N.D. -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 -0.1 N.D. -0.3 N.D.
phage phage_bap4 +0.1 +0.3 N.D. -0.2 N.D.
phage phage_bap4 +0.4 -0.1 N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.0 N.D. +0.4 N.D.
complex community Community=guar; Passage=4 +0.2 +0.2 N.D. -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.3 N.D. -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 N.D. +0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.4 +0.2 N.D. -0.0 N.D.
no phage control no phage control +0.3 +0.3 N.D. -0.0 N.D.
complex community Community=guar; Passage=4 +0.4 +0.5 N.D. -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.6 +0.2 N.D. -0.1 N.D.
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