Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF676 and GFF677 are separated by 51 nucleotidesGFF677 and GFF678 are separated by 80 nucleotidesGFF678 and GFF679 are separated by 0 nucleotidesGFF679 and GFF680 overlap by 2 nucleotides GFF676 - Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-), at 361,076 to 361,732 GFF676 GFF677 - FIG00433688: hypothetical protein, at 361,784 to 362,218 GFF677 GFF678 - Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ Beta-ketoadipyl CoA thiolase (EC 2.3.1.-), at 362,299 to 363,501 GFF678 GFF679 - Putative membrane protein, at 363,502 to 364,140 GFF679 GFF680 - FIG00761799: membrane protein, at 364,139 to 364,960 GFF680
Group Condition GFF676 GFF677 GFF678 GFF679 GFF680
carbon source Ying_sugar7 rep B; time point 3 -2.6 -0.8 -0.3 -0.2 +0.1
carbon source Ying_all64 rep B; time point 3 -1.5 -1.3 -0.2 +0.2 +0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -2.2 -0.5 -0.2 +0.4 +0.0
carbon source Ying_AminoAcid20 rep C; time point 3 -2.1 -0.5 -0.1 +0.3 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -2.3 -0.4 +0.0 +0.2 +0.1
carbon source Ying_Others16 rep C; time point 3 -3.3 +0.4 +0.1 +0.3 +0.0
carbon source Ying_all64 rep C; time point 1 -1.4 -1.1 +0.2 -0.0 +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -2.2 -0.2 +0.0 +0.2 +0.1
carbon source Ying_all64 rep B; time point 2 -1.7 -0.6 +0.0 +0.1 +0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -2.5 +0.4 -0.0 +0.1 +0.1
carbon source Ying_all64 rep A; time point 3 -1.6 -0.3 -0.1 +0.1 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -2.0 -0.1 +0.1 +0.0 +0.2
carbon source Ying_AminoAcid20 rep A; time point 1 -1.4 -0.5 +0.1 +0.1 +0.0
carbon source Ying_Others16 rep B; time point 2 -1.8 +0.0 -0.1 +0.2 +0.1
carbon source Ying_Others16 rep C; time point 1 -1.4 -0.4 +0.1 +0.2 +0.0
carbon source Ying_Others16 rep A; time point 2 -2.0 +0.4 +0.1 -0.1 +0.2
carbon source Ying_all64 rep A; time point 2 -1.9 +0.2 +0.1 +0.2 +0.1
carbon source Ying_all64 rep B; time point 1 -1.4 -0.4 +0.1 +0.0 +0.2
carbon source Ying_Others16 rep C; time point 2 -1.9 +0.4 +0.2 +0.0 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -1.3 +0.4 -0.2 -0.1 +0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -1.2 +0.2 +0.1 +0.1 -0.1
carbon source Ying_Others16 rep A; time point 1 -1.5 +0.5 +0.2 +0.0 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 1 -1.1 +0.5 +0.0 +0.1 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 -1.0 +0.6 -0.0 +0.2 +0.0
carbon source Ying_Others16 rep B; time point 3 -1.0 +0.5 -0.1 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -1.0 +0.3 +0.2 +0.3 +0.2
carbon source Ying_all64 rep C; time point 3 -1.5 +0.7 +0.0 +0.8 -0.1
carbon source Ying_all64 rep C; time point 2 -0.4 +0.5 +0.3 +0.3 +0.0
carbon source Ying_Others16 rep A; time point 3 -0.3 +1.7 +0.3 +0.0 +0.1
carbon source Ying_Nucleobase14 rep A; time point 2 +0.9 +0.7 +0.4 +0.1 +0.1
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