Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6770 and GFF6771 overlap by 4 nucleotidesGFF6771 and GFF6772 are separated by 0 nucleotidesGFF6772 and GFF6773 are separated by 150 nucleotidesGFF6773 and GFF6774 are separated by 107 nucleotides GFF6770 - 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21), at 16,198 to 16,842 GFF6770 GFF6771 - 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58), at 16,839 to 17,750 GFF6771 GFF6772 - L-arabonate dehydratase (EC 4.2.1.25), at 17,751 to 19,487 GFF6772 GFF6773 - Transcriptional regulator, GntR family, at 19,638 to 20,381 GFF6773 GFF6774 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 20,489 to 21,871 GFF6774
Group Condition GFF6770 GFF6771 GFF6772 GFF6773 GFF6774
complex community Community=arabino-guar; Passage=4 -3.1 -0.4 -2.3 -0.8 -0.2
complex community Community=Locust bean gum; Passage=4 -3.6 -0.5 -1.7 +0.1 -0.7
complex community Community=Locust bean gum; Passage=4 -4.4 -0.5 -1.2 +0.3 -0.6
complex community Community=arabino-guar; Passage=4 -4.2 -0.3 -0.9 -0.7 +0.2
complex community Community=Locust bean gum; Passage=4 -4.2 +0.2 -0.3 -1.0 -0.5
complex community Community=Locust bean gum; Passage=4 -4.2 +0.1 -0.4 +0.1 -0.9
complex community Community=arabino-guar; Passage=4 -3.5 -0.0 -0.3 -1.0 -0.2
complex community Community=guar; Passage=4 -4.0 -0.0 -0.5 -0.3 +0.0
complex community Community=arabino-guar; Passage=4 -2.8 -0.0 -1.7 -0.3 +0.1
complex community Community=guar; Passage=4 -2.8 +0.5 -0.3 -1.4 -0.0
complex community Community=guar; Passage=4 -1.4 +0.1 -1.9 -0.4 +0.1
complex community Community=guar; Passage=4 -2.1 -0.4 -1.3 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.0 -0.5 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 -0.5 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.0 -0.5 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.1 -0.3 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 +0.3 -0.3 -0.2
phage phage_bap4 +0.2 +0.0 -0.4 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.1 -0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 -0.2 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 +0.0 +0.3 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.0 +0.5 -0.2 -0.4
phage phage_bap4 -0.0 +0.2 -0.6 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.3 +0.4 -0.2 +0.1
no phage control no phage control +0.2 -0.1 -0.4 +0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.3 +0.0 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.6 -0.2 -0.2
phage phage_bap4 +0.3 -0.2 -0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.2 +0.5 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.4 +0.6 -0.6 +0.2
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