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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6761 and GFF6762 are separated by 145 nucleotides
GFF6762 and GFF6763 are separated by 156 nucleotides
GFF6763 and GFF6764 are separated by 75 nucleotides
GFF6764 and GFF6765 are separated by 108 nucleotides
GFF6761 - Ferric iron ABC transporter, permease protein, at 7,203 to 8,879
GFF6761
GFF6762 - Ferric iron ABC transporter, iron-binding protein, at 9,025 to 10,086
GFF6762
GFF6763 - uncharacterized domain 1, at 10,243 to 10,791
GFF6763
GFF6764 - Transcriptional regulator, MarR family, at 10,867 to 11,322
GFF6764
GFF6765 - Uncharacterized MFS-type transporter, at 11,431 to 12,744
GFF6765
Group
Condition
GFF6761
GFF6762
GFF6763
GFF6764
GFF6765
complex community
Community=arabino-guar; Passage=4
+0.4
+0.1
+0.1
-1.6
+0.1
complex community
Community=Kojac gum; Passage=4
+0.1
-0.0
+0.1
-1.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
+0.1
+0.0
-0.5
-0.4
complex community
Community=arabino-guar; Passage=4
-0.1
+0.0
-0.3
-0.8
+0.4
vitamin
M9 with Supernatant from Cyptococcus
-0.0
-0.2
-0.2
-0.3
+0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.0
-0.1
-0.4
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.3
-0.2
+0.3
-0.8
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.0
+0.1
-0.6
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
+0.1
-0.5
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.0
-0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.0
-0.1
-0.2
-0.4
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.1
+0.3
-1.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.0
-0.1
-0.4
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.0
+0.0
+0.2
-0.5
-0.0
complex community
Community=guar; Passage=4
-0.1
+0.1
+0.3
-0.5
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.0
+0.0
-0.5
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.1
+0.1
-0.0
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.1
-0.2
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
-0.1
+0.4
+0.1
complex community
Community=guar; Passage=4
+0.0
-0.0
-0.1
+0.1
+0.4
phage
phage_bap4
+0.1
+0.2
-0.1
+0.3
-0.1
phage
phage_bap4
+0.2
+0.1
-0.2
+0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.1
+0.0
+0.7
-0.3
no phage control
no phage control
+0.1
+0.1
-0.1
+0.2
+0.3
phage
phage_bap4
+0.0
+0.2
-0.1
+0.4
+0.0
complex community
Community=arabino-guar; Passage=4
+0.2
-0.3
+0.2
-0.0
+0.6
phage
phage_bap4
-0.0
+0.0
+0.1
+0.7
-0.2
complex community
Community=arabino-guar; Passage=4
+0.1
-0.0
+0.4
+0.4
-0.0
complex community
Community=guar; Passage=4
+0.1
+0.1
-0.0
+0.1
+0.6
complex community
Community=guar; Passage=4
-0.1
+0.3
+0.1
+0.8
+0.6
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