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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6756 and GFF6757 are separated by 66 nucleotides
GFF6757 and GFF6758 are separated by 708 nucleotides
GFF6758 and GFF6759 are separated by 61 nucleotides
GFF6759 and GFF6760 are separated by 101 nucleotides
GFF6756 - ATP-dependent DNA helicase pcrA (EC 3.6.1.-), at 3,883 to 4,161
GFF6756
GFF6757 - no description, at 4,228 to 4,518
GFF6757
GFF6758 - Lactoylglutathione lyase (EC 4.4.1.5), at 5,227 to 5,676
GFF6758
GFF6759 - Glutathione S-transferase, at 5,738 to 6,418
GFF6759
GFF6760 - Ferric iron ABC transporter, ATP-binding protein, at 6,520 to 7,206
GFF6760
Group
Condition
GFF6756
GFF6757
GFF6758
GFF6759
GFF6760
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.0
-0.1
+0.3
-1.1
complex community
Community=arabino-guar; Passage=4
-0.5
-0.5
-0.3
+0.1
+0.2
complex community
Community=guar; Passage=4
-0.1
-0.1
-0.1
-0.4
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.2
+0.5
-0.5
-0.8
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.1
-0.0
+0.5
-0.5
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.2
+0.0
-0.2
+0.3
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.3
+0.1
-0.0
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.0
-0.1
+0.5
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
-0.2
-0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.1
-0.0
+0.5
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.2
-0.1
+0.8
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-0.0
+0.1
+0.5
-0.2
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.1
+0.4
-0.6
+0.6
complex community
Community=arabino-guar; Passage=4
+0.2
+0.2
-0.2
+0.1
+0.3
phage
phage_bap4
+0.1
-0.0
-0.1
+0.2
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.0
+0.1
+0.7
-0.1
phage
phage_bap4
-0.0
+0.0
-0.1
+0.5
+0.2
phage
phage_bap4
+0.1
+0.1
-0.1
+0.4
+0.2
complex community
Community=guar; Passage=4
+0.1
-0.0
-0.1
-0.3
+1.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.0
+0.0
+0.7
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.0
-0.1
+0.4
+0.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.0
-0.0
+0.8
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.0
-0.0
+0.6
+0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
-0.1
-0.0
+0.5
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.2
-0.0
+0.5
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.1
-0.2
+0.6
+0.2
complex community
Community=arabino-guar; Passage=4
+0.2
-0.0
+0.1
+0.6
+0.1
complex community
Community=guar; Passage=4
+0.2
-0.1
+0.4
+0.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.1
+0.2
+0.3
+0.5
complex community
Community=arabino-guar; Passage=4
-0.2
+0.1
-0.0
+0.5
+0.9
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