Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF670 and GFF671 are separated by 120 nucleotidesGFF671 and GFF672 are separated by 18 nucleotidesGFF672 and GFF673 are separated by 114 nucleotidesGFF673 and GFF674 are separated by 78 nucleotides GFF670 - putative amidase Psyr_2260, at 722,738 to 724,282 GFF670 GFF671 - hypothetical protein, at 724,403 to 724,825 GFF671 GFF672 - Transcriptional regulator, LysR family, at 724,844 to 725,752 GFF672 GFF673 - Lysophospholipase L1 and related esterases, at 725,867 to 727,138 GFF673 GFF674 - no description, at 727,217 to 727,438 GFF674
Group Condition GFF670 GFF671 GFF672 GFF673 GFF674
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 +0.2 +0.1 -5.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.0 -0.0 -0.0 -2.3
complex community Community=guar; Passage=4 -0.2 +0.2 -0.0 -0.3 -1.9
complex community Community=guar; Passage=4 -0.3 +0.2 +0.1 -0.3 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.3 +0.2 -1.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 +0.0 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.1 -0.1 -0.0 -0.7
no phage control no phage control -0.0 -0.0 -0.0 +0.1 -1.0
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 -0.7 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 +0.2 +0.2 -0.8
phage phage_bap4 -0.1 +0.1 -0.1 +0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.2 +0.1 +0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 -0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.2 +0.1 +0.1 -0.6
complex community Community=guar; Passage=4 -0.0 -0.3 -0.1 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.0 -0.3 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.4 +0.0 +0.1 +0.3
phage phage_bap4 -0.0 -0.1 -0.1 -0.2 +0.6
complex community Community=Locust bean gum; Passage=4 -0.3 +0.6 -0.1 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.0 -0.2 -0.2 +0.4
phage phage_bap4 -0.2 +0.1 -0.2 +0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 -0.4 +0.1 +0.6
phage phage_bap4 -0.1 +0.2 +0.0 -0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -0.1 -0.1 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 -0.2 +0.0 +0.1 +0.1 +0.8
phage phage_bap4 +0.1 +0.2 -0.1 +0.0 +0.8
no phage control no phage control -0.0 +0.2 -0.0 +0.4 +0.5
complex community Community=guar; Passage=4 +0.2 +0.3 +0.1 -0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 -0.1 -0.2 +1.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.3 +0.7 +0.2 +0.5
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