Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6574 and GFF6575 are separated by 12 nucleotidesGFF6575 and GFF6576 overlap by 4 nucleotidesGFF6576 and GFF6577 are separated by 12 nucleotidesGFF6577 and GFF6578 overlap by 4 nucleotides GFF6574 - Conjugative transfer protein TrbL, at 14,941 to 16,266 GFF6574 GFF6575 - Conjugative transfer protein TrbJ, at 16,279 to 17,049 GFF6575 GFF6576 - Conjugative transfer protein TrbE, at 17,046 to 19,520 GFF6576 GFF6577 - Conjugative transfer protein TrbD, at 19,533 to 19,805 GFF6577 GFF6578 - Conjugative transfer protein TrbC, at 19,802 to 20,179 GFF6578
Group Condition GFF6574 GFF6575 GFF6576 GFF6577 GFF6578
complex community Community=arabino-guar; Passage=4 -0.0 -3.5 -0.2 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.3 -0.0 -0.2 N.D. N.D.
complex community Community=Kojac gum; Passage=4 +0.0 -1.1 -0.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.6 +0.1 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.8 -0.1 -0.2 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -1.1 +0.2 N.D. N.D.
phage phage_bap4 -0.4 -0.3 -0.0 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.6 -0.8 -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.9 +0.3 +0.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=1 -0.1 -0.4 +0.1 N.D. N.D.
complex community Community=guar; Passage=4 -0.7 +0.1 +0.3 N.D. N.D.
phage phage_bap4 +0.4 -0.4 -0.1 N.D. N.D.
phage phage_bap4 +0.4 -0.4 -0.0 N.D. N.D.
phage phage_bap4 +0.3 -0.3 +0.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.7 -0.1 N.D. N.D.
complex community Community=Kojac gum; Passage=1 -0.3 +0.3 +0.1 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.6 -0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.4 +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.5 +0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.4 +0.1 N.D. N.D.
complex community Community=guar; Passage=4 +0.5 +0.2 -0.5 N.D. N.D.
phage phage_bap4 +0.6 -0.2 -0.0 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +1.0 -0.9 +0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.8 +0.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.8 -0.2 +0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 +0.3 +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.7 +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.9 +0.2 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.0 +1.0 -0.1 N.D. N.D.
complex community Community=guar; Passage=4 +0.4 +0.4 +0.3 N.D. N.D.
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