Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6550 and GFF6551 are separated by 30 nucleotidesGFF6551 and GFF6552 are separated by 16 nucleotidesGFF6552 and GFF6553 are separated by 370 nucleotidesGFF6553 and GFF6554 overlap by 4 nucleotides GFF6550 - 4'-phosphopantetheinyl transferase (EC 2.7.8.-), at 47,556 to 48,371 GFF6550 GFF6551 - Plasmid replication/partition related protein, at 48,402 to 49,244 GFF6551 GFF6552 - Uncharacterized lipoprotein Bmul_4930, at 49,261 to 49,845 GFF6552 GFF6553 - hypothetical protein, at 50,216 to 50,974 GFF6553 GFF6554 - Putative ATP/GTP-binding protein, at 50,971 to 51,495 GFF6554
Group Condition GFF6550 GFF6551 GFF6552 GFF6553 GFF6554
complex community Community=arabino-guar; Passage=4 +0.2 N.D. +0.1 N.D. -1.4
complex community Community=guar; Passage=4 -0.3 N.D. -0.1 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. -0.1 N.D. -1.0
complex community Community=guar; Passage=4 -0.3 N.D. -0.1 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.2 N.D. +0.0 N.D. -0.4
complex community Community=guar; Passage=4 -0.1 N.D. +0.1 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 N.D. +0.1 N.D. -0.5
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.1 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.0 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 N.D. -0.0 N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.3 N.D. +0.1 N.D. +0.2
complex community Community=Kojac gum; Passage=4 -0.2 N.D. -0.1 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. +0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 N.D. -0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 N.D. +0.0 N.D. +0.4
phage phage_bap4 -0.1 N.D. -0.1 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. +0.0 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. -0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. -0.0 N.D. +0.4
phage phage_bap4 +0.0 N.D. +0.0 N.D. +0.5
phage phage_bap4 +0.3 N.D. -0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.1 N.D. +0.6
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.0 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. +0.0 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. +0.1 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.3 N.D. +0.7
complex community Community=arabino-guar; Passage=4 +0.3 N.D. -0.1 N.D. +0.8
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 N.D. +0.0 N.D. +0.7
complex community Community=guar; Passage=4 +0.5 N.D. +0.0 N.D. +0.9
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