Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6537 and GFF6538 are separated by 100 nucleotidesGFF6538 and GFF6539 overlap by 13 nucleotidesGFF6539 and GFF6540 are separated by 4 nucleotidesGFF6540 and GFF6541 are separated by 26 nucleotides GFF6537 - hypothetical protein, at 33,185 to 34,024 GFF6537 GFF6538 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 34,125 to 35,753 GFF6538 GFF6539 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 35,741 to 37,291 GFF6539 GFF6540 - FIG00994002: hypothetical protein, at 37,296 to 38,432 GFF6540 GFF6541 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 38,459 to 39,262 GFF6541
Group Condition GFF6537 GFF6538 GFF6539 GFF6540 GFF6541
phage phage_bap4 -0.1 -0.2 -0.3 -0.1 N.D.
complex community Community=guar; Passage=4 +0.2 -0.0 -0.3 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.2 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 -0.1 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 -0.1 -0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 -0.1 -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 -0.0 -0.2 -0.3 N.D.
no phage control no phage control +0.1 +0.0 -0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.2 +0.1 N.D.
complex community Community=guar; Passage=4 -0.3 +0.0 -0.0 +0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 +0.2 -0.1 N.D.
phage phage_bap4 +0.1 -0.1 -0.1 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.5 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 -0.0 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 +0.3 +0.0 N.D.
complex community Community=guar; Passage=4 +0.1 -0.2 +0.2 +0.0 N.D.
phage phage_bap4 -0.0 +0.2 -0.2 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.1 -0.1 N.D.
complex community Community=guar; Passage=4 +0.1 -0.1 -0.2 +0.3 N.D.
phage phage_bap4 -0.1 -0.1 +0.0 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.1 +0.2 N.D.
complex community Community=Kojac gum; Passage=4 +0.0 -0.2 +0.2 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 +0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 -0.1 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 +0.0 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 +0.1 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 +0.3 -0.1 +0.3 N.D.
phage phage_bap4 +0.0 +0.2 -0.1 +0.4 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 +0.1 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 +0.2 +0.0 -0.1 N.D.
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