Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF651 and GFF652 are separated by 91 nucleotidesGFF652 and GFF653 overlap by 4 nucleotidesGFF653 and GFF654 are separated by 156 nucleotidesGFF654 and GFF655 are separated by 18 nucleotides GFF651 - Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-), at 701,887 to 704,175 GFF651 GFF652 - bacteriophytochrome heme oxygenase BphO, at 704,267 to 704,905 GFF652 GFF653 - no description, at 704,902 to 705,318 GFF653 GFF654 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 705,475 to 706,236 GFF654 GFF655 - hypothetical protein, at 706,255 to 706,674 GFF655
Group Condition GFF651 GFF652 GFF653 GFF654 GFF655
complex community Community=guar; Passage=4 -0.3 +0.2 -1.3 +0.1 -0.5
complex community Community=guar; Passage=4 -0.0 -0.2 -0.9 -0.8 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.6 -0.9 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.0 -0.3 -0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.4 +0.2 -0.7 +0.1 -0.3
phage phage_bap4 -1.1 -0.2 -0.1 +0.4 -0.1
phage phage_bap4 -1.1 -0.0 +0.0 -0.1 +0.2
phage phage_bap4 -1.1 -0.2 +0.1 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.6 -0.7 +0.0 -0.8
complex community Community=Locust bean gum; Passage=4 -0.1 +0.3 -1.3 +0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.0 -0.2 +0.1 -0.3
complex community Community=guar; Passage=4 -0.4 +0.2 -0.4 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.2 +0.2 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.0 +0.1 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.2 -0.1 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.1 -0.4 +0.3 -0.1
phage phage_bap4 -0.8 +0.1 +0.1 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 -0.5 +0.2 -0.7 +0.3 +0.0
complex community Community=Kojac gum; Passage=4 -0.3 -0.0 -0.8 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.2 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.3 -0.3 -0.1 -0.3
complex community Community=arabino-guar; Passage=4 -0.3 +0.4 -0.0 +0.1 -0.3
phage phage_bap4 -0.3 +0.0 -0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 +0.3 -0.1 +0.2
phage phage_bap4 +0.2 +0.0 +0.1 +0.4 -0.3
phage phage_bap4 +0.2 +0.3 -0.4 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 -0.3 +0.9 -0.2
phage phage_bap4 +0.5 -0.2 -0.1 +0.1 +0.4
no phage control no phage control -0.0 +0.2 -0.1 +0.3 +0.4
complex community Community=guar; Passage=4 -0.3 +0.7 -0.3 +0.2 +0.8
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