Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6526 and GFF6527 are separated by 102 nucleotidesGFF6527 and GFF6528 are separated by 89 nucleotidesGFF6528 and GFF6529 are separated by 13 nucleotidesGFF6529 and GFF6530 are separated by 21 nucleotides GFF6526 - Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11), at 22,143 to 22,694 GFF6526 GFF6527 - Transcriptional regulator, AcrR family, at 22,797 to 23,474 GFF6527 GFF6528 - Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77), at 23,564 to 24,241 GFF6528 GFF6529 - Rhodanese-like domain protein, at 24,255 to 24,590 GFF6529 GFF6530 - Type I secretion outer membrane protein, TolC family, at 24,612 to 26,165 GFF6530
Group Condition GFF6526 GFF6527 GFF6528 GFF6529 GFF6530
complex community Community=arabino-guar; Passage=4 +0.1 -0.7 -2.0 N.D. -0.4
complex community Community=guar; Passage=4 -0.1 -0.1 -1.8 N.D. -0.3
complex community Community=Kojac gum; Passage=4 +0.1 -0.3 -1.5 N.D. -0.4
complex community Community=arabino-guar; Passage=4 -0.0 -0.4 -1.2 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.8 -0.8 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 -2.1 N.D. +0.3
complex community Community=guar; Passage=4 +0.0 -0.2 -1.7 N.D. +0.1
complex community Community=guar; Passage=4 +0.3 -0.4 -1.6 N.D. -0.0
complex community Community=Locust bean gum; Passage=4 +0.2 -0.6 -1.6 N.D. +0.3
complex community Community=Locust bean gum; Passage=4 +0.3 -0.1 -1.7 N.D. +0.0
complex community Community=guar; Passage=4 +0.1 -0.0 -1.2 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.6 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 -1.1 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.3 -0.6 N.D. -0.0
phage phage_bap4 -0.1 +0.0 -0.6 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 -0.6 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.3 -0.2 N.D. +0.1
phage phage_bap4 +0.1 -0.1 -0.6 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.5 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.2 -0.6 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.2 -0.4 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 -0.2 N.D. +0.2
no phage control no phage control -0.0 +0.1 -0.5 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 -0.3 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 -0.2 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 -0.4 N.D. +0.2
phage phage_bap4 -0.0 +0.1 -0.5 N.D. +0.3
no phage control no phage control +0.1 +0.1 -0.4 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.3 +0.1 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.4 N.D. +0.2
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