Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6524 and GFF6525 are separated by 80 nucleotidesGFF6525 and GFF6526 are separated by 14 nucleotidesGFF6526 and GFF6527 are separated by 102 nucleotidesGFF6527 and GFF6528 are separated by 89 nucleotides GFF6524 - Zinc-regulated outer membrane receptor, at 19,484 to 21,658 GFF6524 GFF6525 - hypothetical protein, at 21,739 to 22,128 GFF6525 GFF6526 - Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11), at 22,143 to 22,694 GFF6526 GFF6527 - Transcriptional regulator, AcrR family, at 22,797 to 23,474 GFF6527 GFF6528 - Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77), at 23,564 to 24,241 GFF6528
Group Condition GFF6524 GFF6525 GFF6526 GFF6527 GFF6528
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.1 -0.7 -2.0
complex community Community=guar; Passage=4 -0.0 +0.1 -0.1 -0.1 -1.8
complex community Community=guar; Passage=4 +0.1 -0.3 +0.0 -0.2 -1.7
complex community Community=arabino-guar; Passage=4 +0.0 +0.1 -0.0 -0.4 -1.2
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 +0.2 -0.2 -2.1
complex community Community=arabino-guar; Passage=4 -0.1 +0.4 -0.3 -0.8 -0.8
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 +0.3 -0.1 -1.7
complex community Community=Kojac gum; Passage=4 -0.1 +0.7 +0.1 -0.3 -1.5
complex community Community=guar; Passage=4 -0.1 +0.2 +0.1 -0.0 -1.2
complex community Community=guar; Passage=4 -0.0 +0.6 +0.3 -0.4 -1.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.3 -0.1 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.0 -0.0 -0.3 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.1 -0.1 -0.2 -0.5
complex community Community=Locust bean gum; Passage=4 +0.4 +0.8 +0.2 -0.6 -1.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.3 +0.0 -0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.3 -0.0 -0.0 -0.4
phage phage_bap4 +0.0 -0.1 +0.1 -0.1 -0.6
phage phage_bap4 +0.1 -0.4 -0.1 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 -0.0 -0.1 -0.6
complex community Community=Locust bean gum; Passage=4 -0.2 +0.8 +0.2 -0.3 -1.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.2 -0.1 -0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.3 +0.2 -0.2 -0.6
no phage control no phage control +0.1 +0.1 -0.0 +0.1 -0.5
complex community Community=arabino-guar; Passage=4 +0.2 +0.4 -0.1 -0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.3 -0.1 -0.2 +0.3
no phage control no phage control +0.1 +0.2 +0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.3 +0.0 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.4 +0.1 -0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.2 +0.1 -0.0 +0.4
remove
GFF6524
plot		 remove
GFF6525
plot		 remove
GFF6526		 remove
GFF6527
plot		 remove
GFF6528
plot