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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF650 and GFF651 overlap by 8 nucleotides
GFF651 and GFF652 are separated by 244 nucleotides
GFF652 and GFF653 are separated by 133 nucleotides
GFF653 and GFF654 are separated by 100 nucleotides
GFF650 - Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-), at 648,102 to 650,666
GFF650
GFF651 - hypothetical protein, at 650,659 to 650,964
GFF651
GFF652 - hypothetical protein, at 651,209 to 651,325
GFF652
GFF653 - ATP-dependent RNA helicase, at 651,459 to 652,385
GFF653
GFF654 - Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2), at 652,486 to 653,163
GFF654
Group
Condition
GFF650
GFF651
GFF652
GFF653
GFF654
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.0
-0.3
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
-0.3
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.2
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
-0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.1
-0.3
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
+0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
+0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
+0.3
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.2
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.1
+0.5
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.3
+0.4
-0.3
+0.1
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