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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6511 and GFF6512 are separated by 2 nucleotides
GFF6512 and GFF6513 are separated by 159 nucleotides
GFF6513 and GFF6514 are separated by 309 nucleotides
GFF6514 and GFF6515 are separated by 57 nucleotides
GFF6511 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 6,982 to 7,710
GFF6511
GFF6512 - 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14), at 7,713 to 8,348
GFF6512
GFF6513 - Phosphogluconate dehydratase (EC 4.2.1.12), at 8,508 to 10,340
GFF6513
GFF6514 - Short-chain dehydrogenase, at 10,650 to 11,471
GFF6514
GFF6515 - no description, at 11,529 to 12,515
GFF6515
Group
Condition
GFF6511
GFF6512
GFF6513
GFF6514
GFF6515
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-3.5
-3.2
+0.1
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-3.5
-3.4
+0.5
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-3.6
-3.2
+0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-3.6
-3.1
+0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-3.5
-3.4
+0.3
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-3.5
-3.2
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-3.7
-2.7
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-3.6
-2.7
+0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-3.6
-2.5
+0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-3.5
-3.0
+0.5
-0.1
complex community
Community=arabino-guar; Passage=4
-0.0
-4.3
-2.1
-0.7
+1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-3.5
-2.8
+0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-3.6
-3.1
+0.6
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-3.6
-3.3
+0.5
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-3.6
-2.2
+0.0
-0.1
complex community
Community=arabino-guar; Passage=4
-0.0
-4.0
-2.1
-0.3
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-3.4
-2.4
+0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-3.5
-2.4
+0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.2
-3.5
-2.9
+0.5
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-3.6
-2.4
+0.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
-3.6
-2.3
+0.4
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-3.6
-2.8
+0.4
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-3.5
-2.3
+0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-2.5
-3.2
+0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
-3.6
-2.3
+0.2
+0.3
complex community
Community=arabino-guar; Passage=4
+0.4
-4.1
-1.1
-0.3
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-2.5
-2.7
+0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
-3.6
-1.8
+0.4
+0.1
complex community
Community=arabino-guar; Passage=4
-0.1
-4.1
-1.3
+0.0
+0.7
complex community
Community=guar; Passage=4
+0.0
-4.2
+0.6
-0.6
+0.3
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