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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6508 and GFF6509 are separated by 263 nucleotides
GFF6509 and GFF6510 are separated by 111 nucleotides
GFF6510 and GFF6511 are separated by 12 nucleotides
GFF6511 and GFF6512 are separated by 2 nucleotides
GFF6508 - hypothetical protein, at 2,624 to 3,850
GFF6508
GFF6509 - hypothetical protein, at 4,114 to 4,668
GFF6509
GFF6510 - Gamma-glutamyltranspeptidase (EC 2.3.2.2), at 4,780 to 6,969
GFF6510
GFF6511 - Haloacid dehalogenase, type II (EC 3.8.1.2), at 6,982 to 7,710
GFF6511
GFF6512 - 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14), at 7,713 to 8,348
GFF6512
Group
Condition
GFF6508
GFF6509
GFF6510
GFF6511
GFF6512
complex community
Community=guar; Passage=4
+0.1
-0.4
-0.2
-0.2
-3.9
complex community
Community=guar; Passage=4
-0.1
-0.3
+0.0
-0.1
-3.9
complex community
Community=guar; Passage=4
+0.1
-0.1
-0.0
-0.1
-4.3
complex community
Community=arabino-guar; Passage=4
+0.0
-0.4
+0.2
-0.1
-4.1
complex community
Community=guar; Passage=4
-0.1
-0.1
+0.0
+0.0
-4.2
phage
phage_bap4
-0.0
-0.0
+0.0
-0.1
-4.2
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.2
+0.1
+0.1
-4.0
no phage control
no phage control
-0.1
-0.0
+0.0
+0.0
-4.1
complex community
Community=arabino-guar; Passage=4
+0.2
-0.4
+0.2
-0.0
-4.0
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.2
+0.1
-0.1
-4.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.1
+0.0
-0.3
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.2
+0.0
-0.0
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.0
-0.1
-0.2
-3.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.2
-0.0
-0.0
-3.7
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.1
-0.1
-0.2
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.2
+0.1
-0.1
-3.5
complex community
Community=arabino-guar; Passage=4
+0.3
+0.1
+0.1
-0.0
-4.3
complex community
Community=Locust bean gum; Passage=4
-0.0
+0.1
+0.2
-0.2
-3.8
complex community
Community=Kojac gum; Passage=4
-0.0
+0.2
+0.2
-0.1
-3.9
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.2
-0.0
+0.1
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
-0.0
+0.1
-3.7
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.1
+0.0
-0.0
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
+0.0
-0.0
+0.2
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
+0.1
+0.2
-3.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.2
+0.1
-0.1
-3.6
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.1
-0.1
+0.2
-3.6
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.0
+0.2
+0.0
+0.2
-3.6
complex community
Community=arabino-guar; Passage=4
+0.3
+0.2
+0.1
+0.4
-4.1
phage
phage_bap4
+0.1
+0.2
+0.1
+0.1
-3.7
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.4
-0.1
+0.2
-3.6
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