Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_03275 and PS417_03280 are separated by 61 nucleotidesPS417_03280 and PS417_03285 overlap by 4 nucleotidesPS417_03285 and PS417_03290 overlap by 11 nucleotidesPS417_03290 and PS417_03295 are separated by 148 nucleotides PS417_03275: PS417_03275 - mammalian cell entry protein, at 749,018 to 751,321 _03275 PS417_03280: PS417_03280 - chromosome partitioning protein ParA, at 751,383 to 754,223 _03280 PS417_03285: PS417_03285 - chromosome partitioning protein, at 754,220 to 754,927 _03285 PS417_03290: PS417_03290 - hypothetical protein, at 754,917 to 756,194 _03290 PS417_03295: PS417_03295 - energy transducer TonB, at 756,343 to 757,128 _03295
Group Condition PS417_03275 PS417_03280 PS417_03285 PS417_03290 PS417_03295
stress Cisplatin 0.01 mg/ml -0.2 -0.9 -0.9 -1.0 N.D.
phage P. simiae OR Antrim MOI 1 -0.3 -0.5 -0.8 -0.7 N.D.
phage P. simiae OR Antrim MOI 10 -0.4 -0.4 -1.1 -0.2 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 -0.3 -0.9 -0.3 N.D.
solid stress Fraxetin 3 mM; solid stress -0.7 -0.1 -0.7 +0.0 N.D.
agar plate interaction control Taped volatile agar plate with no fungus -0.2 -0.4 -0.1 -0.8 N.D.
stress Nalidixic 0.025 mg/ml -0.3 -0.4 -0.3 -0.5 N.D.
phage P. simiae OR1 MOI 0.1 -0.5 -0.1 -0.6 -0.3 N.D.
phage P. simiae Grant Run MOI 10 +0.0 -0.1 -0.8 -0.4 N.D.
stress Nalidixic 0.015 mg/ml -0.4 -0.4 -0.2 -0.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.1 -0.3 -0.7 -0.4 N.D.
phage JP1 MOI 0.1 -0.1 -0.5 -0.4 -0.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -0.5 -0.4 -0.5 N.D.
stress Doxycycline hyclate 0.001 mg/ml -1.1 -0.1 +0.0 +0.1 N.D.
stress R2A with Fusaric 120 ug/mL -0.6 +0.1 -0.5 +0.0 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.2 -0.2 -0.5 -0.4 N.D.
stress Gentamicin 0.008 mg/ml +0.3 -0.1 -0.6 -0.5 N.D.
nophagecontrol Only library +0.3 -0.1 -1.0 -0.1 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 -0.2 -0.8 -0.5 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +0.1 -1.0 -0.1 N.D.
seeds Growth on radish seeds for 72 hours +0.1 -0.5 +0.3 -0.4 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 -0.4 -0.4 -0.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -0.1 +0.9 -0.4 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +0.1 -0.4 -0.3 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +0.2 -0.5 +0.1 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.1 +0.0 -0.4 -0.0 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.4 +0.3 -0.4 -0.4 N.D.
carbon source L-Valine (C) +0.7 -0.1 +0.4 -0.0 N.D.
stress Neomycin 0.04 mg/ml +2.6 -0.3 -0.4 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.1 +0.3 +1.3 +0.2 N.D.
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