Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6445 and GFF6446 overlap by 14 nucleotidesGFF6446 and GFF6447 are separated by 67 nucleotidesGFF6447 and GFF6448 are separated by 195 nucleotidesGFF6448 and GFF6449 are separated by 13 nucleotides GFF6445 - Nitroreductase, at 21,400 to 22,308 GFF6445 GFF6446 - Xaa-Pro aminopeptidase (EC 3.4.11.9), at 22,295 to 23,368 GFF6446 GFF6447 - no description, at 23,436 to 24,272 GFF6447 GFF6448 - Glucans biosynthesis protein D precursor, at 24,468 to 26,066 GFF6448 GFF6449 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8), at 26,080 to 26,490 GFF6449
Group Condition GFF6445 GFF6446 GFF6447 GFF6448 GFF6449
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.2 -0.0 -0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.6 -0.0 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 +0.1 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.5 -0.0 -0.1 +0.3
complex community Community=guar; Passage=4 N.D. -0.8 +0.0 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.5 +0.1 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 +0.2 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.1 +0.2 -0.1
phage phage_bap4 N.D. -0.3 +0.2 -0.0 +0.1
complex community Community=Kojac gum; Passage=4 N.D. +0.1 -0.3 +0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 -0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.1 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 -0.1 +0.3 -0.4
complex community Community=arabino-guar; Passage=4 N.D. -0.3 +0.0 +0.1 +0.4
complex community Community=guar; Passage=4 N.D. -0.1 +0.0 +0.0 +0.4
complex community Community=guar; Passage=4 N.D. +0.4 -0.3 +0.1 +0.2
complex community Community=guar; Passage=4 N.D. +0.2 -0.0 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 +0.2 -0.0 +0.3
no phage control no phage control N.D. +0.2 -0.0 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 +0.2 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.0 +0.2 +0.0 +0.3
complex community Community=Kojac gum; Passage=1 N.D. +0.1 +0.1 +0.3 +0.2
phage phage_bap4 N.D. +0.1 +0.1 +0.3 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.5 -0.2 +0.4 -0.0
complex community Community=Locust bean gum; Passage=1 N.D. +0.2 -0.0 +0.0 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.5 -0.3 +0.2 +0.3
no phage control no phage control N.D. +0.3 +0.2 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.5 -0.2 +0.2 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.6 +0.1 +0.1 +0.6
remove
GFF6445
plot		 remove
GFF6446
plot		 remove
GFF6447		 remove
GFF6448
plot		 remove
GFF6449
plot