Fitness for 3 genes in Variovorax sp. SCN45

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500 ntGFF6422 and GFF6423 are separated by 112 nucleotidesGFF6423 and GFF6424 are separated by 153 nucleotides GFF6422 - Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17), at 99,190 to 100,398 GFF6422 GFF6423 - hypothetical protein, at 100,511 to 100,663 GFF6423 GFF6424 - Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32), at 100,817 to 102,688 GFF6424
Group Condition GFF6422 GFF6423 GFF6424
complex community Community=Locust bean gum; Passage=1 -0.2 N.D. -0.1
phage phage_bap4 -0.1 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.0
phage phage_bap4 -0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 N.D. +0.1
no phage control no phage control -0.1 N.D. +0.0
phage phage_bap4 +0.0 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. -0.1
complex community Community=arabino-guar; Passage=4 -0.1 N.D. +0.2
phage phage_bap4 +0.1 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. -0.0
phage phage_bap4 +0.1 N.D. +0.0
complex community Community=arabino-guar; Passage=4 -0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. +0.0
complex community Community=arabino-guar; Passage=4 -0.1 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.1
complex community Community=arabino-guar; Passage=4 +0.0 N.D. +0.2
complex community Community=guar; Passage=4 +0.1 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 N.D. +0.1
complex community Community=guar; Passage=4 +0.0 N.D. +0.3
complex community Community=guar; Passage=4 +0.2 N.D. +0.3
complex community Community=guar; Passage=4 +0.2 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.6
complex community Community=Kojac gum; Passage=4 +0.1 N.D. +0.7
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. +0.6
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. +0.8
complex community Community=Locust bean gum; Passage=4 +0.7 N.D. +0.6
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