Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6411 and GFF6412 overlap by 4 nucleotidesGFF6412 and GFF6413 are separated by 13 nucleotidesGFF6413 and GFF6414 are separated by 120 nucleotidesGFF6414 and GFF6415 are separated by 54 nucleotides GFF6411 - Histidine ABC transporter, ATP-binding protein, at 86,019 to 86,801 GFF6411 GFF6412 - Histidine ABC transporter, permease protein, at 86,798 to 87,640 GFF6412 GFF6413 - Histidine ABC transporter, substrate-binding protein, at 87,654 to 88,625 GFF6413 GFF6414 - no description, at 88,746 to 88,982 GFF6414 GFF6415 - ATP-dependent DNA helicase RecQ, at 89,037 to 90,812 GFF6415
Group Condition GFF6411 GFF6412 GFF6413 GFF6414 GFF6415
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 -0.2 N.D. -0.3
complex community Community=Kojac gum; Passage=4 -0.3 +0.2 -0.6 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.2 -0.1 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.0 -0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.1 N.D. -0.0
complex community Community=Kojac gum; Passage=1 +0.1 -0.2 -0.2 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 +0.1 -0.1 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.0 N.D. +0.0
phage phage_bap4 +0.1 -0.2 -0.1 N.D. -0.0
complex community Community=guar; Passage=4 -0.3 -0.1 -0.1 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.0 +0.0 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 +0.1 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.1 -0.1 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.1 N.D. -0.0
no phage control no phage control +0.2 -0.0 -0.2 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 -0.2 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.2 +0.2 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 +0.2 N.D. -0.1
complex community Community=Locust bean gum; Passage=1 +0.3 -0.1 +0.0 N.D. -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.3 -0.2 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.2 +0.2 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 +0.0 N.D. -0.1
no phage control no phage control +0.5 +0.1 -0.1 N.D. -0.0
complex community Community=Locust bean gum; Passage=4 +1.1 -0.2 -0.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.2 +0.0 N.D. -0.0
complex community Community=arabino-guar; Passage=4 +0.4 -0.0 +0.2 N.D. -0.0
complex community Community=guar; Passage=4 +0.2 +0.4 -0.1 N.D. +0.1
complex community Community=arabino-guar; Passage=4 +0.7 +0.0 -0.0 N.D. -0.0
complex community Community=guar; Passage=4 -0.1 +0.5 +0.4 N.D. +0.4
complex community Community=guar; Passage=4 +0.8 +0.3 +0.2 N.D. +0.1
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