Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6401 and GFF6402 overlap by 4 nucleotidesGFF6402 and GFF6403 are separated by 27 nucleotidesGFF6403 and GFF6404 are separated by 148 nucleotidesGFF6404 and GFF6405 are separated by 7 nucleotides GFF6401 - Formiminoglutamic iminohydrolase (EC 3.5.3.13), at 75,354 to 76,736 GFF6401 GFF6402 - Imidazolonepropionase (EC 3.5.2.7), at 76,733 to 77,959 GFF6402 GFF6403 - Stresses-induced protein Ves (HutD), at 77,987 to 78,559 GFF6403 GFF6404 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 78,708 to 79,376 GFF6404 GFF6405 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 79,384 to 80,136 GFF6405
Group Condition GFF6401 GFF6402 GFF6403 GFF6404 GFF6405
complex community Community=Locust bean gum; Passage=4 -2.6 -0.1 -1.7 +0.3 +0.4
complex community Community=Locust bean gum; Passage=4 -1.8 -0.3 -0.9 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 -2.2 -0.0 -0.7 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 -1.8 -0.2 -0.1 +0.0 +0.1
complex community Community=Locust bean gum; Passage=4 -2.1 +0.0 +0.1 +0.1 +0.3
complex community Community=guar; Passage=4 -2.4 +0.1 -0.0 +0.2 +0.5
complex community Community=guar; Passage=4 -1.6 +0.4 +0.2 -0.1 +0.2
complex community Community=guar; Passage=4 -1.5 +0.3 +0.4 -0.1 +0.1
complex community Community=Kojac gum; Passage=4 -1.8 -0.2 +0.6 +0.2 +0.3
phage phage_bap4 -0.3 -0.1 -0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.0 -0.5 -0.1 -0.1
no phage control no phage control -0.3 +0.0 -0.5 -0.1 +0.1
phage phage_bap4 -0.4 -0.0 -0.5 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 -0.7 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -1.5 +0.2 +0.3 +0.2 +0.0
complex community Community=guar; Passage=4 -0.9 +0.6 +0.0 -0.5 +0.0
phage phage_bap4 -0.3 -0.0 -0.4 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.2 -0.5 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 -0.6 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 -0.3 -0.1 +0.1
complex community Community=Locust bean gum; Passage=1 +0.1 +0.1 -0.4 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.0 -0.5 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 -0.5 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 -1.4 -0.0 +1.2 +0.2 -0.2
complex community Community=arabino-guar; Passage=4 -1.2 +0.2 +0.5 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.0 -0.4 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 +0.1 +0.4 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.2 +0.5 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.7 +0.2 -0.1
phage phage_bap4 -0.2 +0.2 +0.6 -0.0 +0.2
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