Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6398 and GFF6399 are separated by 167 nucleotidesGFF6399 and GFF6400 are separated by 40 nucleotidesGFF6400 and GFF6401 are separated by 11 nucleotidesGFF6401 and GFF6402 overlap by 4 nucleotides GFF6398 - SH3, type 3, at 72,592 to 73,257 GFF6398 GFF6399 - 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain, at 73,425 to 74,477 GFF6399 GFF6400 - N-formylglutamate deformylase (EC 3.5.1.68), at 74,518 to 75,342 GFF6400 GFF6401 - Formiminoglutamic iminohydrolase (EC 3.5.3.13), at 75,354 to 76,736 GFF6401 GFF6402 - Imidazolonepropionase (EC 3.5.2.7), at 76,733 to 77,959 GFF6402
Group Condition GFF6398 GFF6399 GFF6400 GFF6401 GFF6402
complex community Community=guar; Passage=4 +0.2 -0.3 -0.0 -2.4 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 +0.0 -1.8 -0.3
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 +0.1 -1.8 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 -0.0 -2.1 +0.0
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 +0.1 -2.2 -0.0
complex community Community=Kojac gum; Passage=4 +0.1 -0.1 +0.0 -1.8 -0.2
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 +0.2 -2.6 -0.1
complex community Community=guar; Passage=4 -0.1 -0.1 -0.1 -1.6 +0.4
complex community Community=guar; Passage=4 +0.1 -0.4 +0.1 -1.5 +0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.0 -1.4 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 -0.0 -1.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.0 -0.1 -1.2 +0.2
phage phage_bap4 +0.0 +0.0 -0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.0 -0.1 -0.5 +0.1
phage phage_bap4 +0.0 -0.1 +0.1 -0.4 -0.0
phage phage_bap4 -0.0 +0.0 +0.1 -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 -0.0 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 +0.0 -0.2 -0.2
complex community Community=guar; Passage=4 -0.1 +0.0 +0.2 -0.9 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 -0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 +0.0 -0.2 -0.2
no phage control no phage control +0.1 +0.0 +0.1 -0.3 +0.0
phage phage_bap4 +0.2 +0.0 +0.1 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.1 +0.1 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 +0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.1 +0.1 -0.2
phage phage_bap4 +0.1 +0.1 +0.1 -0.1 +0.0
no phage control no phage control +0.2 +0.0 +0.1 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 -0.1 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.2 +0.2 -0.0
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