Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6374 and GFF6375 are separated by 74 nucleotidesGFF6375 and GFF6376 overlap by 4 nucleotidesGFF6376 and GFF6377 overlap by 23 nucleotidesGFF6377 and GFF6378 are separated by 52 nucleotides GFF6374 - predicted 2-keto-3-deoxyxylonate dehydratase, at 43,606 to 44,799 GFF6374 GFF6375 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 44,874 to 48,632 GFF6375 GFF6376 - Uncharacterized aldehyde oxidase, 2Fe-2S subunit, at 48,629 to 49,129 GFF6376 GFF6377 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 49,107 to 50,267 GFF6377 GFF6378 - Nicotinamidase (EC 3.5.1.19), at 50,320 to 51,045 GFF6378
Group Condition GFF6374 GFF6375 GFF6376 GFF6377 GFF6378
complex community Community=guar; Passage=4 -5.0 +0.1 N.D. -0.0 -0.6
complex community Community=guar; Passage=4 -3.5 +0.0 N.D. -0.2 -1.3
complex community Community=arabino-guar; Passage=4 +0.1 -0.1 N.D. -0.4 -2.9
complex community Community=arabino-guar; Passage=4 -2.2 -0.0 N.D. -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus -1.8 -0.0 N.D. +0.1 -0.7
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 N.D. -0.1 -2.2
complex community Community=guar; Passage=4 +1.0 -0.0 N.D. -0.6 -2.0
complex community Community=Locust bean gum; Passage=4 -0.6 +0.3 N.D. +0.4 -1.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.7 -0.3 N.D. -0.0 -2.0
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 N.D. +0.1 -1.8
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 -0.0 N.D. +0.1 -2.0
phage phage_bap4 -1.0 +0.1 N.D. +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.4 +0.1 N.D. +0.0 -1.5
complex community Community=Locust bean gum; Passage=4 -1.2 +0.5 N.D. -0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus +1.2 +0.1 N.D. -0.3 -1.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.7 -0.0 N.D. -0.4 -0.9
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.6 +0.2 N.D. -0.4 -1.0
phage phage_bap4 +0.7 +0.1 N.D. +0.1 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +1.0 +0.0 N.D. -0.5 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 +0.1 N.D. -0.1 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 +0.1 N.D. -0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +1.0 +0.0 N.D. -0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus +1.1 +0.1 N.D. +0.1 -0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +1.0 +0.1 N.D. +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +1.0 +0.4 N.D. +0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL +1.1 -0.1 N.D. -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus +1.2 -0.1 N.D. -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +1.2 -0.0 N.D. +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +1.5 +0.1 N.D. +0.2 -0.5
complex community Community=Locust bean gum; Passage=4 +0.7 +0.0 N.D. +0.2 +0.6
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