Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF635 and GFF636 are separated by 155 nucleotidesGFF636 and GFF637 are separated by 229 nucleotidesGFF637 and GFF638 are separated by 7 nucleotidesGFF638 and GFF639 are separated by 118 nucleotides GFF635 - Urea ABC transporter, permease protein UrtB, at 684,215 to 685,129 GFF635 GFF636 - Urea ABC transporter, substrate-binding protein UrtA, at 685,285 to 686,541 GFF636 GFF637 - Two-component system sensor histidine kinase/response regulator hybrid, at 686,771 to 690,163 GFF637 GFF638 - Two-component transcriptional response regulator, LuxR family, at 690,171 to 691,043 GFF638 GFF639 - hypothetical protein, at 691,162 to 691,932 GFF639
Group Condition GFF635 GFF636 GFF637 GFF638 GFF639
complex community Community=Locust bean gum; Passage=4 -1.0 -0.1 -0.4 -0.0 +0.1
complex community Community=Kojac gum; Passage=4 -0.8 +0.0 -0.2 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.1 -0.0 -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 -0.5 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.1 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 +0.1 -0.0 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 -0.0 -0.5 -0.2
complex community Community=guar; Passage=4 +0.4 +0.1 +0.1 -1.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.0 +0.0 +0.5 -0.2
phage phage_bap4 -0.3 -0.2 -0.1 +0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.0 +0.2 -0.1 +0.2
phage phage_bap4 -0.2 -0.3 +0.1 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 +0.1 -0.5 +0.1
complex community Community=guar; Passage=4 -0.1 +0.4 -0.2 -0.4 +0.2
complex community Community=arabino-guar; Passage=4 +0.5 +0.5 -0.4 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.0 -0.2 +0.3 +0.3
phage phage_bap4 -0.1 -0.1 -0.2 +0.6 +0.1
no phage control no phage control -0.1 -0.0 -0.1 +0.5 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.4 -0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 +0.2 +0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 -0.1 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.3 -0.1 +0.2 -0.0
complex community Community=arabino-guar; Passage=4 +0.7 +0.6 +0.1 -0.7 -0.2
phage phage_bap4 +0.3 +0.2 +0.1 -0.1 +0.3
phage phage_bap4 -0.1 +0.2 +0.3 +0.4 +0.2
phage phage_bap4 -0.1 +0.3 +0.2 +0.4 +0.2
phage phage_bap4 +0.1 +0.0 +0.3 +0.4 +0.1
complex community Community=guar; Passage=4 -0.1 +0.8 +0.4 +0.5 -0.1
complex community Community=guar; Passage=4 +0.3 +0.6 -0.0 +0.5 +0.3
complex community Community=arabino-guar; Passage=4 +1.0 +0.4 -0.2 +0.7 -0.1
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