Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6349 and GFF6350 are separated by 78 nucleotidesGFF6350 and GFF6351 are separated by 31 nucleotidesGFF6351 and GFF6352 are separated by 1 nucleotidesGFF6352 and GFF6353 overlap by 1 nucleotides GFF6349 - no description, at 11,359 to 11,658 GFF6349 GFF6350 - T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA, at 11,737 to 13,650 GFF6350 GFF6351 - T6SS associated component TagF (ImpM), at 13,682 to 14,395 GFF6351 GFF6352 - T6SS component TssM (IcmF/VasK), at 14,397 to 18,056 GFF6352 GFF6353 - T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain, at 18,056 to 19,426 GFF6353
Group Condition GFF6349 GFF6350 GFF6351 GFF6352 GFF6353
complex community Community=arabino-guar; Passage=4 -1.7 -0.2 -0.6 -0.0 -0.1
complex community Community=guar; Passage=4 -1.4 -0.1 +0.3 -0.1 -0.4
complex community Community=guar; Passage=4 -0.6 +0.0 -0.4 +0.1 -0.5
complex community Community=Kojac gum; Passage=4 -1.2 +0.3 +0.3 +0.4 -0.9
complex community Community=Locust bean gum; Passage=4 +0.5 +0.2 -0.2 +0.0 -1.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.2 -0.1 +0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.0 -0.2 -0.1 -0.6
phage phage_bap4 +0.1 +0.1 -0.4 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.9 +0.1 -0.2 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 -0.0 -0.2 +0.4
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.0 +0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.1 -0.1 -0.0 -0.4
complex community Community=Locust bean gum; Passage=4 -0.9 -0.0 -0.3 +0.3 +1.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.2 -0.1 +0.1 +0.4
complex community Community=guar; Passage=4 -0.6 +0.7 -0.4 +0.3 -0.0
complex community Community=Kojac gum; Passage=1 -0.4 -0.1 +0.2 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.0 -0.1 -0.0 +0.9
complex community Community=Locust bean gum; Passage=1 +0.2 +0.0 -0.6 +0.0 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.2 +0.2 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.0 -0.3 +0.2 +0.4
no phage control no phage control +0.5 -0.2 -0.0 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.2 -0.0 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.0 +0.3 -0.0 +0.3
phage phage_bap4 +0.5 +0.2 +0.3 +0.0 -0.1
complex community Community=guar; Passage=4 +1.0 +0.1 -0.1 +0.4 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.0 +0.0 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.1 -0.0 +1.0 +0.1 +0.5
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 +0.4 -0.2 +1.2
complex community Community=arabino-guar; Passage=4 -0.4 +0.4 -0.1 +0.3 +1.5
complex community Community=Locust bean gum; Passage=4 +0.9 +0.3 +0.7 -0.0 +0.6
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