Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_03195	PS417_03200	PS417_03205	PS417_03210	PS417_03215
phage	Wcs_1	-0.1	-1.9	-0.4	+0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-1.2	-0.4	-0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.7	-0.1	-0.4	-0.6
nitrogen source	Adenine (N)	-0.0	-0.0	-1.8	+0.2	+0.1
phage	Wcs_0.1	+0.1	-1.2	-0.3	+0.0	-0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.0	-1.3	-0.2	+0.2	-0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	-0.6	-0.4	-0.2	-0.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.1	-0.0	-1.6	+0.3	+0.0
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.1	-0.0	-1.6	+0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.7	-0.1	+0.2	+0.2
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.0	-0.0	-1.4	+0.3	+0.1
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-1.4	+0.4	+0.2	-0.0
seeds	Growth on radish seeds for 72 hours	+0.3	-1.3	+0.0	-0.0	+0.0
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.1	+0.1	-1.5	+0.2	+0.3
phage	P. simiae OR Antrim MOI 1	-0.2	-1.0	+0.0	+0.3	+0.3
phage	P. simiae OR Antrim MOI 1	+0.1	-0.7	+0.5	+0.0	-0.3
soil	soil sample 7; outgrowth in LB	+0.4	-0.7	+0.4	+0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.8	-0.3	-0.0	-0.3
stress	methylglyoxal 0.032 vol%	-0.4	+0.4	+0.6	-0.1	-0.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5	-0.7	+0.5	+0.0	-0.1
motility	inner cut, LB soft agar motility assay	-0.2	+0.7	-0.4	+0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	-0.5	-0.1	+0.2	+0.4
seeds	Growth on radish seeds for 24 hours	+0.4	+0.6	+0.1	-0.2	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	-0.0	+0.6	-0.3	-0.2	+0.6
seeds	Growth on radish seeds for 72 hours	+0.5	+0.9	-0.4	+0.1	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	+0.8	+0.2	+0.3	-0.0
supernatant control	Vogels_fungal_media 0.1X	-0.1	+1.1	+0.3	-0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	+0.8	+0.3	-0.1	+0.4
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.6	+0.4	+0.6	+0.0	+0.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5	+0.6	+0.5	+0.7	-0.1