Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6293 and GFF6294 are separated by 152 nucleotidesGFF6294 and GFF6295 are separated by 11 nucleotidesGFF6295 and GFF6296 are separated by 130 nucleotidesGFF6296 and GFF6297 are separated by 62 nucleotides GFF6293 - Periplasmic thiol:disulfide interchange protein DsbA, at 82,804 to 83,451 GFF6293 GFF6294 - Cell division protein, at 83,604 to 84,368 GFF6294 GFF6295 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 84,380 to 86,065 GFF6295 GFF6296 - FIG00443752: hypothetical protein, at 86,196 to 86,528 GFF6296 GFF6297 - Putative transmembrane protein, at 86,591 to 87,043 GFF6297
Group Condition GFF6293 GFF6294 GFF6295 GFF6296 GFF6297
phage phage_bap4 -1.7 -1.7 N.D. N.D. -0.2
phage phage_bap4 -0.7 -2.0 N.D. N.D. -0.2
phage phage_bap4 -0.6 -1.7 N.D. N.D. -0.0
phage phage_bap4 -1.1 -1.1 N.D. N.D. -0.0
phage phage_bap4 -0.9 -1.3 N.D. N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.1 -1.0 N.D. N.D. +0.1
phage phage_bap4 -0.7 -1.1 N.D. N.D. -0.1
no phage control no phage control -0.5 -1.3 N.D. N.D. -0.0
phage phage_bap4 -0.9 -0.8 N.D. N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.6 -1.2 N.D. N.D. -0.0
no phage control no phage control -0.5 -1.2 N.D. N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 -0.9 N.D. N.D. -0.0
phage phage_bap4 -0.5 -1.2 N.D. N.D. -0.0
no phage control no phage control -0.7 -0.9 N.D. N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.8 -0.8 N.D. N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.6 -1.0 N.D. N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.7 -1.1 N.D. N.D. +0.2
phage phage_bap4 -0.2 -1.5 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.8 -0.8 N.D. N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.0 -0.7 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.9 -0.7 N.D. N.D. +0.2
complex community Community=guar; Passage=4 -1.1 +0.2 N.D. N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -1.2 -0.3 N.D. N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.7 N.D. N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -1.0 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 -1.1 +0.2 N.D. N.D. -0.3
complex community Community=guar; Passage=4 -1.0 +0.3 N.D. N.D. -0.4
no phage control no phage control -0.6 -0.7 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.9 +0.4 N.D. N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.6 +0.6 N.D. N.D. -0.4
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