Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6291 and GFF6292 overlap by 4 nucleotidesGFF6292 and GFF6293 are separated by 125 nucleotidesGFF6293 and GFF6294 are separated by 152 nucleotidesGFF6294 and GFF6295 are separated by 11 nucleotides GFF6291 - Lipopolysaccharide ABC transporter, ATP-binding protein LptB, at 81,177 to 81,971 GFF6291 GFF6292 - Lipopolysaccharide export system protein LptA, at 81,968 to 82,678 GFF6292 GFF6293 - Periplasmic thiol:disulfide interchange protein DsbA, at 82,804 to 83,451 GFF6293 GFF6294 - Cell division protein, at 83,604 to 84,368 GFF6294 GFF6295 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 84,380 to 86,065 GFF6295
Group Condition GFF6291 GFF6292 GFF6293 GFF6294 GFF6295
phage phage_bap4 N.D. N.D. -1.7 -1.7 N.D.
phage phage_bap4 N.D. N.D. -0.7 -2.0 N.D.
phage phage_bap4 N.D. N.D. -0.6 -1.7 N.D.
phage phage_bap4 N.D. N.D. -1.1 -1.1 N.D.
phage phage_bap4 N.D. N.D. -0.9 -1.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -1.1 -1.0 N.D.
no phage control no phage control N.D. N.D. -0.5 -1.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.6 -1.2 N.D.
phage phage_bap4 N.D. N.D. -0.7 -1.1 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.7 -1.1 N.D.
phage phage_bap4 N.D. N.D. -0.9 -0.8 N.D.
no phage control no phage control N.D. N.D. -0.5 -1.2 N.D.
phage phage_bap4 N.D. N.D. -0.2 -1.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.8 -0.9 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.8 -0.8 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -1.0 -0.7 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.6 -1.0 N.D.
phage phage_bap4 N.D. N.D. -0.5 -1.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.9 -0.7 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.8 -0.8 N.D.
no phage control no phage control N.D. N.D. -0.7 -0.9 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -1.2 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.9 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -1.0 -0.4 N.D.
phage phage_bap4 N.D. N.D. -0.4 -1.0 N.D.
phage phage_bap4 N.D. N.D. -0.6 -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.8 -0.6 N.D.
complex community Community=guar; Passage=4 N.D. N.D. -1.1 +0.2 N.D.
complex community Community=guar; Passage=4 N.D. N.D. -1.0 +0.3 N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.9 +0.4 N.D.
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