Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF627 and GFF628 are separated by 107 nucleotidesGFF628 and GFF629 overlap by 4 nucleotidesGFF629 and GFF630 are separated by 6 nucleotidesGFF630 and GFF631 are separated by 16 nucleotides GFF627 - Secretion protein HlyD, at 676,579 to 677,751 GFF627 GFF628 - hypothetical protein, at 677,859 to 678,527 GFF628 GFF629 - hypothetical protein, at 678,524 to 679,903 GFF629 GFF630 - CxxC_CXXC_SSSS domain protein, FmdB family, at 679,910 to 680,254 GFF630 GFF631 - Formamidase (EC 3.5.1.49), at 680,271 to 681,503 GFF631
Group Condition GFF627 GFF628 GFF629 GFF630 GFF631
complex community Community=arabino-guar; Passage=4 -4.1 -0.0 +0.2 N.D. -0.7
complex community Community=Locust bean gum; Passage=4 -3.0 +0.6 -0.8 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 -0.4 +0.5 -2.3 N.D. -0.6
complex community Community=Locust bean gum; Passage=4 -0.5 -0.6 -0.9 N.D. -0.1
complex community Community=guar; Passage=4 -2.3 +0.5 +0.1 N.D. +0.1
complex community Community=guar; Passage=4 -0.1 +0.1 -1.7 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.2 -0.6 N.D. +0.2
phage phage_bap4 +0.4 +0.2 -0.9 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus -0.5 -0.3 -0.3 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 +0.5 -0.9 N.D. +0.6
complex community Community=guar; Passage=4 +0.7 -0.3 -0.7 N.D. +0.0
complex community Community=Locust bean gum; Passage=4 -1.8 +0.3 +0.9 N.D. +0.5
phage phage_bap4 +0.6 -0.5 -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.1 -0.8 N.D. +0.2
complex community Community=Kojac gum; Passage=4 -0.7 -0.2 +1.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 -0.0 -0.8 N.D. +0.1
no phage control no phage control -0.6 +0.2 +0.0 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus +0.5 -0.1 -0.8 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.2 -0.5 N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.3 +1.2 -0.4 N.D. -0.4
complex community Community=guar; Passage=4 -0.7 +0.3 +0.6 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 +0.3 -0.4 N.D. +0.1
complex community Community=arabino-guar; Passage=4 -0.0 +0.7 +0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.5 -0.2 +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.2 -0.2 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.5 +0.0 +0.2 N.D. +0.4
phage phage_bap4 +0.7 +0.4 +0.0 N.D. +0.2
phage phage_bap4 +0.3 +0.6 +0.3 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.0 +0.6 N.D. +0.3
phage phage_bap4 +0.6 +0.6 +0.3 N.D. +0.6
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