Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6264 and GFF6265 overlap by 19 nucleotidesGFF6265 and GFF6266 are separated by 21 nucleotidesGFF6266 and GFF6267 are separated by 64 nucleotidesGFF6267 and GFF6268 are separated by 98 nucleotides GFF6264 - Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23), at 56,134 to 56,727 GFF6264 GFF6265 - Thiamine-monophosphate kinase (EC 2.7.4.16), at 56,709 to 57,665 GFF6265 GFF6266 - putative lipoprotein, at 57,687 to 58,367 GFF6266 GFF6267 - Transcriptional regulator, LysR family, at 58,432 to 59,328 GFF6267 GFF6268 - BUG/TctC family periplasmic protein, at 59,427 to 60,446 GFF6268
Group Condition GFF6264 GFF6265 GFF6266 GFF6267 GFF6268
complex community Community=arabino-guar; Passage=4 -1.7 N.D. +0.0 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.5 N.D. +0.0 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.3 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 N.D. -0.3 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 N.D. -0.5 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 N.D. -0.5 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 N.D. +0.2 N.D. -0.1
complex community Community=guar; Passage=4 -0.4 N.D. +0.5 N.D. -0.4
complex community Community=guar; Passage=4 +0.1 N.D. +0.3 N.D. -0.7
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. +0.5 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 N.D. +0.2 N.D. +0.1
complex community Community=arabino-guar; Passage=4 -0.4 N.D. -0.2 N.D. +0.6
phage phage_bap4 -0.2 N.D. -0.1 N.D. +0.3
complex community Community=Kojac gum; Passage=4 -0.0 N.D. +0.8 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 N.D. -0.2 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. +0.3 N.D. +0.2
phage phage_bap4 +0.1 N.D. +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. -0.0 N.D. +0.3
phage phage_bap4 +0.3 N.D. +0.1 N.D. +0.2
complex community Community=guar; Passage=4 +0.3 N.D. +0.3 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. +0.3 N.D. -0.1
no phage control no phage control +0.3 N.D. +0.3 N.D. +0.1
phage phage_bap4 +0.2 N.D. +0.4 N.D. +0.3
phage phage_bap4 +0.3 N.D. +0.5 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.2 N.D. +0.8
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. +0.1 N.D. +0.6
phage phage_bap4 +0.4 N.D. +0.3 N.D. +0.4
complex community Community=guar; Passage=4 +0.9 N.D. +0.2 N.D. +0.5
remove
GFF6264
plot		 remove
GFF6265
plot		 remove
GFF6266		 remove
GFF6267
plot		 remove
GFF6268
plot