Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6252 and GFF6253 are separated by 31 nucleotidesGFF6253 and GFF6254 are separated by 55 nucleotidesGFF6254 and GFF6255 are separated by 105 nucleotidesGFF6255 and GFF6256 overlap by 4 nucleotides GFF6252 - Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1), at 46,030 to 46,833 GFF6252 GFF6253 - Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1), at 46,865 to 47,815 GFF6253 GFF6254 - Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1), at 47,871 to 48,728 GFF6254 GFF6255 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase (EC 3.6.1.63), at 48,834 to 49,988 GFF6255 GFF6256 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37), at 49,985 to 50,698 GFF6256
Group Condition GFF6252 GFF6253 GFF6254 GFF6255 GFF6256
complex community Community=arabino-guar; Passage=4 +0.2 -1.1 -0.2 -0.2 -0.7
complex community Community=arabino-guar; Passage=4 -1.0 +0.1 -0.3 -0.4 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.8 -0.3 +0.1 -0.0 +0.0
complex community Community=guar; Passage=4 +0.3 -0.1 -0.6 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 -1.0 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.3 -0.1 -0.1 -0.3
complex community Community=arabino-guar; Passage=4 -0.2 -0.6 +0.3 -0.1 +0.1
phage phage_bap4 -0.3 +0.1 -0.4 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.1 +0.2 -0.0 +0.0
phage phage_bap4 -0.2 +0.0 +0.3 +0.1 -0.3
complex community Community=guar; Passage=4 +0.4 -0.0 +0.3 -0.4 -0.3
complex community Community=guar; Passage=4 +0.6 -1.0 +0.1 -0.0 +0.4
phage phage_bap4 -0.3 +0.1 +0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.1 -0.2 +0.3 +0.4
phage phage_bap4 +0.4 -0.0 -0.1 +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.4 -0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.5 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.3 -0.2 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 +0.4 -0.6 +0.6 -0.2 +0.4
complex community Community=Kojac gum; Passage=4 -0.5 -0.1 -0.0 +0.4 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.3 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 +0.1 -0.3 +0.2 +0.2
complex community Community=Kojac gum; Passage=1 -0.3 +0.4 +0.2 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.8 +0.2 +0.2 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.6 +0.2 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.9 -0.1 +0.0 -0.0 +0.2
complex community Community=guar; Passage=4 -0.2 -0.2 +0.7 +0.3 +0.7
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 +0.2 -0.3 +1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.9 +0.5 +0.3 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 +1.1 +0.5 +0.5 +0.0 -0.1
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