Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6229 and GFF6230 are separated by 13 nucleotidesGFF6230 and GFF6231 are separated by 100 nucleotidesGFF6231 and GFF6232 are separated by 9 nucleotidesGFF6232 and GFF6233 are separated by 2 nucleotides GFF6229 - hypothetical protein, at 12,567 to 14,549 GFF6229 GFF6230 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 14,563 to 15,540 GFF6230 GFF6231 - Amidases related to nicotinamidase, at 15,641 to 16,273 GFF6231 GFF6232 - hypothetical protein, at 16,283 to 21,721 GFF6232 GFF6233 - hypothetical protein, at 21,724 to 23,433 GFF6233
Group Condition GFF6229 GFF6230 GFF6231 GFF6232 GFF6233
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.0 -0.9 -0.1 +0.0
complex community Community=guar; Passage=4 -0.2 -0.1 -0.9 -0.0 +0.0
complex community Community=Kojac gum; Passage=1 +0.1 +0.0 -0.7 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.3 -0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.1 +0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.4 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.3 -0.2 +0.1 +0.2
complex community Community=guar; Passage=4 +0.2 +0.3 -0.9 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.3 -0.2 -0.1 +0.3
complex community Community=Kojac gum; Passage=4 -0.3 +0.5 -0.6 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.2 +0.2 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.5 +0.2 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 +0.1 -0.3 +0.2
phage phage_bap4 -0.4 -0.0 +0.1 +0.1 +0.1
phage phage_bap4 -0.0 -0.1 -0.5 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.1 -0.2 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.3 +0.0 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 -1.2 +0.5 +0.6 -0.2 +0.3
phage phage_bap4 -0.4 -0.1 +0.2 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.2 -0.1 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.3 +0.3 +0.1 +0.6
phage phage_bap4 -0.3 +0.1 +0.1 +0.3 +0.4
complex community Community=Locust bean gum; Passage=4 -0.1 +0.3 +0.2 -0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 +0.7 -0.3 +0.2
phage phage_bap4 -0.1 +0.2 +0.3 +0.1 +0.5
complex community Community=guar; Passage=4 +0.4 +0.1 +0.9 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.7 -0.2 -0.0 +0.4
complex community Community=arabino-guar; Passage=4 -0.6 +0.9 +0.8 -0.0 +0.2
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 +0.7 +0.2 +0.3
complex community Community=guar; Passage=4 +0.3 +0.5 +0.3 -0.0 +0.8
remove
GFF6229
plot		 remove
GFF6230
plot		 remove
GFF6231		 remove
GFF6232
plot		 remove
GFF6233
plot