Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6211 and GFF6212 are separated by 169 nucleotidesGFF6212 and GFF6213 are separated by 140 nucleotidesGFF6213 and GFF6214 are separated by 26 nucleotidesGFF6214 and GFF6215 are separated by 56 nucleotides GFF6211 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 118,553 to 119,317 GFF6211 GFF6212 - Transcriptional regulator, AsnC family, at 119,487 to 119,909 GFF6212 GFF6213 - Ornithine cyclodeaminase (EC 4.3.1.12), at 120,050 to 121,099 GFF6213 GFF6214 - Amidinotransferase family protein, at 121,126 to 122,085 GFF6214 GFF6215 - no description, at 122,142 to 122,873 GFF6215
Group Condition GFF6211 GFF6212 GFF6213 GFF6214 GFF6215
complex community Community=guar; Passage=4 -0.3 -1.0 -0.6 -0.3 -0.5
complex community Community=arabino-guar; Passage=4 -0.4 -0.6 -0.9 -0.0 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.9 -0.9 +0.2 -0.0
complex community Community=guar; Passage=4 -0.1 -0.7 -0.6 +0.1 -0.0
complex community Community=guar; Passage=4 -0.5 -0.1 -0.6 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 -0.1 -0.5 +0.2 -0.5
complex community Community=guar; Passage=4 +0.1 -0.4 -0.6 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.4 -0.1 -0.6
complex community Community=Locust bean gum; Passage=1 -0.1 -0.4 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.5 -0.0 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 +0.3 -0.8 +0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 +0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 -0.0 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.1 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 -0.8 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.5 -0.7 +0.1 +0.2
phage phage_bap4 -0.2 -0.1 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.3 +0.1 -0.0 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.7 -0.5 +0.1 +0.0
complex community Community=Kojac gum; Passage=4 +0.1 +0.2 -0.7 +0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.2 +0.2 -0.1 -0.3
no phage control no phage control -0.2 +0.2 +0.1 +0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.1 +0.1 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 -0.0 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.4 +0.2 +0.2 -0.0
phage phage_bap4 +0.2 +0.2 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.3 +0.2 -0.1 -0.1
phage phage_bap4 +0.1 +0.3 +0.2 +0.0 +0.0
phage phage_bap4 +0.1 +0.3 +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.3 +0.2 -0.0 -0.1
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