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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6201 and GFF6202 are separated by 10 nucleotides
GFF6202 and GFF6203 are separated by 151 nucleotides
GFF6203 and GFF6204 are separated by 66 nucleotides
GFF6204 and GFF6205 are separated by 126 nucleotides
GFF6201 - Oxidoreductase, aldo/keto reductase family, at 107,769 to 108,593
GFF6201
GFF6202 - Unknown substrate:proton symporter, at 108,604 to 110,094
GFF6202
GFF6203 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 110,246 to 111,229
GFF6203
GFF6204 - Diguanylate cyclase/phosphodiesterase domain 2 (EAL), at 111,296 to 113,068
GFF6204
GFF6205 - FIG00983767: hypothetical protein, at 113,195 to 113,755
GFF6205
Group
Condition
GFF6201
GFF6202
GFF6203
GFF6204
GFF6205
complex community
Community=arabino-guar; Passage=4
-0.1
-1.0
-0.2
-0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
+1.3
-0.8
+0.0
-1.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
+0.1
-0.2
-0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
+0.0
+0.1
-0.6
N.D.
phage
phage_bap4
-0.1
+0.3
+0.1
-0.3
N.D.
phage
phage_bap4
+0.3
+0.3
-0.0
-0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
+0.3
+0.1
-0.6
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.4
+0.1
-0.1
-0.3
N.D.
complex community
Community=Kojac gum; Passage=4
+0.8
-0.3
-0.5
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.4
+0.2
+0.0
-0.4
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.4
+0.1
-0.3
+0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.5
+0.1
+0.5
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+1.0
+0.4
-0.9
-0.4
N.D.
complex community
Community=arabino-guar; Passage=4
-0.5
+0.4
+1.0
-0.6
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.3
-0.1
+0.4
-0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.6
-0.1
+0.1
-0.0
N.D.
complex community
Community=arabino-guar; Passage=4
+0.5
+0.5
+0.2
-0.6
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.2
-0.1
+0.4
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.8
-0.2
+0.1
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.5
-0.1
+0.3
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.9
-0.2
+0.1
+0.0
N.D.
complex community
Community=guar; Passage=4
+0.5
-0.0
+0.3
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
-0.1
+0.2
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.5
+0.2
+0.0
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.4
+0.3
+0.1
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.5
+0.3
-0.1
+0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.5
+0.2
+0.1
+0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.3
+0.2
+0.2
+0.3
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
+0.4
+0.2
+0.4
N.D.
complex community
Community=guar; Passage=4
+0.9
-0.0
+0.5
+0.5
N.D.
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