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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6199 and GFF6200 are separated by 56 nucleotides
GFF6200 and GFF6201 are separated by 64 nucleotides
GFF6201 and GFF6202 are separated by 10 nucleotides
GFF6202 and GFF6203 are separated by 151 nucleotides
GFF6199 - no description, at 106,011 to 106,178
GFF6199
GFF6200 - integral membrane sensor signal transduction histidine kinase, at 106,235 to 107,704
GFF6200
GFF6201 - Oxidoreductase, aldo/keto reductase family, at 107,769 to 108,593
GFF6201
GFF6202 - Unknown substrate:proton symporter, at 108,604 to 110,094
GFF6202
GFF6203 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 110,246 to 111,229
GFF6203
Group
Condition
GFF6199
GFF6200
GFF6201
GFF6202
GFF6203
complex community
Community=arabino-guar; Passage=4
N.D.
+0.1
-0.1
-1.0
-0.2
vitamin
M9 with Supernatant from Cyptococcus
N.D.
-0.3
-0.1
+0.2
-0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
-0.4
+0.3
-0.1
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
+0.1
+0.3
+0.1
-0.2
no phage control
no phage control
N.D.
-0.2
+0.3
+0.1
+0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
-0.0
+0.6
-0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-0.0
+0.4
-0.1
+0.2
complex community
Community=Locust bean gum; Passage=1
N.D.
+0.4
+0.2
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
+0.2
+0.3
+0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
+0.1
+0.5
-0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-0.0
+0.5
+0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
+0.1
+0.5
+0.3
-0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
+0.1
+0.4
+0.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
+0.1
+0.3
+0.2
+0.2
complex community
Community=Locust bean gum; Passage=4
N.D.
+0.7
+0.4
+0.1
-0.3
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
N.D.
+0.2
+0.5
+0.2
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
+0.2
+0.4
+0.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
+0.2
+0.4
+0.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
N.D.
+0.3
+0.8
-0.2
+0.1
complex community
Community=Kojac gum; Passage=1
N.D.
+0.3
+0.5
+0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
+0.2
+0.2
+0.4
+0.2
complex community
Community=Locust bean gum; Passage=4
N.D.
+0.4
+1.3
-0.8
+0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
+1.0
-0.5
+0.1
+0.5
complex community
Community=guar; Passage=4
N.D.
+0.3
+0.5
-0.0
+0.3
complex community
Community=Locust bean gum; Passage=4
N.D.
+0.6
+1.0
+0.4
-0.9
complex community
Community=arabino-guar; Passage=4
N.D.
+0.3
-0.5
+0.4
+1.0
complex community
Community=Kojac gum; Passage=4
N.D.
+1.2
+0.8
-0.3
-0.5
complex community
Community=guar; Passage=4
N.D.
+0.7
+0.9
-0.2
+0.1
complex community
Community=arabino-guar; Passage=4
N.D.
+0.6
+0.5
+0.5
+0.2
complex community
Community=guar; Passage=4
N.D.
+0.9
+0.9
-0.0
+0.5
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