Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF618 and GFF619 are separated by 21 nucleotidesGFF619 and GFF620 are separated by 54 nucleotidesGFF620 and GFF621 are separated by 153 nucleotidesGFF621 and GFF622 overlap by 4 nucleotides GFF618 - Lactoylglutathione lyase and related lyases, at 665,484 to 665,834 GFF618 GFF619 - Aspartate carbamoyltransferase (EC 2.1.3.2), at 665,856 to 667,154 GFF619 GFF620 - Transcriptional regulator, LysR family, at 667,209 to 668,213 GFF620 GFF621 - Aspartate aminotransferase (EC 2.6.1.1), at 668,367 to 669,545 GFF621 GFF622 - BUG/TctC family periplasmic protein, at 669,542 to 670,528 GFF622
Group Condition GFF618 GFF619 GFF620 GFF621 GFF622
complex community Community=Locust bean gum; Passage=4 -1.9 -1.1 -0.6 +0.1 +0.1
complex community Community=guar; Passage=4 -1.7 -0.1 +0.1 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.2 +0.4 -0.0 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.8 +0.1 +0.2 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 +0.2 -0.3 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.2 +0.0 -0.0 -0.2
phage phage_bap4 +0.2 -0.1 -0.1 -0.2 -0.4
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -0.4 -0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 -0.0 -0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.2 -0.3 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.7 -0.0 +0.1 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.1 +0.2 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.2 -0.0 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.2 +0.1 +0.2 -0.3
complex community Community=Kojac gum; Passage=4 +0.2 -0.8 +0.0 +0.0 +0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 +0.1 +0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.2 -0.1 +0.1 +0.3
no phage control no phage control +0.4 -0.0 -0.1 -0.2 -0.3
complex community Community=guar; Passage=4 -0.0 -0.4 +0.3 +0.2 -0.2
complex community Community=guar; Passage=4 -0.4 -0.1 +0.2 -0.0 +0.4
phage phage_bap4 +0.5 -0.1 +0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.3 +0.1 -0.1 -0.2
no phage control no phage control +0.8 -0.0 +0.2 -0.2 -0.2
complex community Community=Locust bean gum; Passage=1 +0.6 -0.0 +0.1 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 -0.3 -0.2 +0.3 +0.3
phage phage_bap4 +0.3 +0.1 +0.2 -0.1 +0.2
complex community Community=guar; Passage=4 +0.6 -0.3 -0.2 +0.3 +0.4
phage phage_bap4 +0.3 -0.2 +0.3 +0.2 +0.3
complex community Community=Locust bean gum; Passage=4 +0.4 -0.0 +0.4 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 +0.5 -0.2 +1.0
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