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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF60 and GFF61 overlap by 4 nucleotides
GFF61 and GFF62 are separated by 102 nucleotides
GFF62 and GFF63 are separated by 178 nucleotides
GFF63 and GFF64 are separated by 191 nucleotides
GFF60 - Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC, at 60,950 to 61,759
GFF60
GFF61 - hypothetical protein, at 61,756 to 62,721
GFF61
GFF62 - Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1), at 62,824 to 63,867
GFF62
GFF63 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 64,046 to 64,735
GFF63
GFF64 - Predicted secretion system X protein GspG-like 3, at 64,927 to 65,358
GFF64
Group
Condition
GFF60
GFF61
GFF62
GFF63
GFF64
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.6
-0.7
-0.2
-0.8
N.D.
carbon source
Ying_Others16 rep A; time point 1
+0.0
-1.0
+0.0
-0.6
N.D.
carbon source
Ying_sugar7 rep A; time point 2
+0.2
-0.8
+0.1
-0.9
N.D.
carbon source
Ying_sugar7 rep B; time point 1
-0.2
-0.2
-0.0
-0.9
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.3
-0.4
-0.2
-1.0
N.D.
carbon source
Ying_Others16 rep A; time point 2
+0.1
-0.2
-0.0
-1.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.2
-0.9
-0.0
-0.4
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.2
-1.0
-0.3
+0.4
N.D.
carbon source
Ying_sugar7 rep C; time point 1
+0.3
+0.3
-0.0
-1.8
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.3
+0.3
-0.3
-0.8
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-0.3
-0.0
-0.5
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.7
-0.8
+0.1
-0.9
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.7
+0.3
-0.2
-0.1
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.0
-0.9
+0.1
+0.0
N.D.
carbon source
Ying_all64 rep C; time point 2
-0.5
+0.5
+0.2
-0.9
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.4
-0.0
+0.0
-1.0
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.1
+0.4
-0.1
-0.8
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.1
-0.2
+0.3
-0.4
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.4
+0.7
-0.1
-0.7
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.7
-0.2
+0.2
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.4
-0.2
+0.1
+0.1
N.D.
carbon source
Ying_Others16 rep C; time point 3
-0.6
+0.2
-0.0
+0.1
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.3
+0.0
+0.1
-0.6
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.3
+0.0
+0.0
-0.6
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
-0.3
+0.4
-0.1
N.D.
carbon source
Ying_Others16 rep C; time point 2
-0.1
+0.5
-0.2
-0.1
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.4
+0.4
+0.0
+0.2
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.4
-0.2
+0.1
+0.5
N.D.
carbon source
Ying_all64 rep A; time point 2
+0.4
+0.4
+0.1
+0.1
N.D.
carbon source
Ying_sugar7 rep B; time point 2
+0.2
+0.6
+0.2
-0.1
N.D.
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