Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6160 and GFF6161 are separated by 19 nucleotidesGFF6161 and GFF6162 overlap by 4 nucleotidesGFF6162 and GFF6163 are separated by 11 nucleotidesGFF6163 and GFF6164 are separated by 4 nucleotides GFF6160 - Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family, at 65,911 to 66,933 GFF6160 GFF6161 - Hydroxymethylpyrimidine ABC transporter, ATPase component, at 66,953 to 67,756 GFF6161 GFF6162 - Dihydrodipicolinate synthase family protein RB7999, at 67,753 to 68,820 GFF6162 GFF6163 - hypothetical protein, at 68,832 to 69,686 GFF6163 GFF6164 - FIG01094124: hypothetical protein, at 69,691 to 70,740 GFF6164
Group Condition GFF6160 GFF6161 GFF6162 GFF6163 GFF6164
complex community Community=arabino-guar; Passage=4 +0.1 -3.1 -0.2 -0.6 -0.2
complex community Community=Locust bean gum; Passage=4 -0.4 -3.1 -0.2 +0.7 -0.4
complex community Community=guar; Passage=4 +0.4 -2.9 +0.6 -2.0 +0.6
complex community Community=guar; Passage=4 -0.6 -3.3 +0.2 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 -0.3 -3.1 +0.3 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -1.8 +0.2 -0.5 +0.0
complex community Community=Locust bean gum; Passage=4 +0.4 -2.9 +0.6 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -1.4 -0.3 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -1.8 +0.2 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -1.0 -0.0 -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.2 -0.4 -0.3 -0.6
complex community Community=arabino-guar; Passage=4 +0.3 -1.0 +0.1 -0.7 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -1.7 +0.4 +0.3 -0.2
phage phage_bap4 +0.0 -1.5 -0.0 +0.2 -0.1
complex community Community=Kojac gum; Passage=1 -0.1 -0.9 +0.4 -0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -1.1 +0.2 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.7 -0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -1.0 -0.4 +0.0 +0.2
complex community Community=guar; Passage=4 -0.0 +1.1 -0.7 -0.9 -0.6
phage phage_bap4 -0.1 -0.5 -0.4 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -1.0 +0.2 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -1.4 +0.0 -0.2 +0.6
complex community Community=Locust bean gum; Passage=4 +0.3 -2.9 +0.4 +1.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.8 -0.3 +0.2 +0.2
no phage control no phage control +0.0 -0.8 -0.0 +0.5 +0.1
complex community Community=Locust bean gum; Passage=4 +0.4 +1.0 +0.7 -2.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.7 -0.4 +0.2 +0.3
complex community Community=Locust bean gum; Passage=1 +0.2 +0.6 +0.3 +0.4 -0.2
complex community Community=guar; Passage=4 +0.0 +1.7 +0.6 -0.5 -0.3
complex community Community=Kojac gum; Passage=4 +1.1 +0.4 -0.0 +1.2 -0.9
remove
GFF6160
plot		 remove
GFF6161
plot		 remove
GFF6162		 remove
GFF6163
plot		 remove
GFF6164
plot