Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6157 and GFF6158 are separated by 16 nucleotidesGFF6158 and GFF6159 are separated by 34 nucleotidesGFF6159 and GFF6160 are separated by 19 nucleotidesGFF6160 and GFF6161 are separated by 19 nucleotides GFF6157 - Carbon monoxide oxidation accessory protein CoxD, at 63,094 to 63,996 GFF6157 GFF6158 - carbon monoxide dehydrogenase E protein, at 64,013 to 65,227 GFF6158 GFF6159 - carbon monoxide dehydrogenase G protein, at 65,262 to 65,891 GFF6159 GFF6160 - Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family, at 65,911 to 66,933 GFF6160 GFF6161 - Hydroxymethylpyrimidine ABC transporter, ATPase component, at 66,953 to 67,756 GFF6161
Group Condition GFF6157 GFF6158 GFF6159 GFF6160 GFF6161
complex community Community=guar; Passage=4 +0.4 -0.8 -0.4 -0.6 -3.3
complex community Community=arabino-guar; Passage=4 +0.3 -1.9 +0.1 +0.1 -3.1
complex community Community=Locust bean gum; Passage=4 -0.4 +0.6 -0.1 -0.4 -3.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.3 -0.3 -0.3 -3.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.6 -0.2 -0.2 -1.8
complex community Community=Locust bean gum; Passage=4 +0.3 +0.5 -1.1 +0.4 -2.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.5 -0.3 +0.0 -1.4
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.0 +0.3 -2.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.3 +0.1 -0.1 -1.8
complex community Community=guar; Passage=4 +0.4 +0.2 -0.1 +0.4 -2.9
phage phage_bap4 +0.1 -0.4 -0.0 +0.0 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.3 -0.3 -0.1 -0.8
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.4 -0.0 -0.1 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.3 -0.1 -0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.4 -0.0 -0.3 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 -0.1 -0.0 -1.4
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.7 +0.0 -0.2 -1.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.3 -0.2 -0.1 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 +0.1 +0.0 -1.0
phage phage_bap4 +0.1 -0.4 +0.2 -0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.0 -0.4 +0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.3 -0.2 +0.1 -0.8
no phage control no phage control +0.2 +0.1 -0.1 +0.0 -0.8
phage phage_bap4 +0.3 -0.3 +0.2 -0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.3 -0.1 +0.2 +0.7
complex community Community=arabino-guar; Passage=4 +0.4 +1.3 +0.0 +0.3 -1.0
complex community Community=Kojac gum; Passage=4 +0.4 -0.0 -0.7 +1.1 +0.4
complex community Community=guar; Passage=4 +0.7 -0.0 -0.9 +0.0 +1.7
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 -0.5 +0.4 +1.0
complex community Community=guar; Passage=4 +0.2 +0.6 +0.1 -0.0 +1.1
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