Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6152 and GFF6153 are separated by 9 nucleotidesGFF6153 and GFF6154 are separated by 183 nucleotidesGFF6154 and GFF6155 are separated by 10 nucleotidesGFF6155 and GFF6156 are separated by 40 nucleotides GFF6152 - hypothetical protein, at 57,497 to 57,874 GFF6152 GFF6153 - Transcriptional activator of acetoin/glycerol metabolism, at 57,884 to 59,026 GFF6153 GFF6154 - Aerobic carbon monoxide dehydrogenase (quinone), small chain (EC 1.2.5.3), at 59,210 to 59,707 GFF6154 GFF6155 - Aerobic carbon monoxide dehydrogenase (quinone), large chain (EC 1.2.5.3), at 59,718 to 62,108 GFF6155 GFF6156 - Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3), at 62,149 to 62,943 GFF6156
Group Condition GFF6152 GFF6153 GFF6154 GFF6155 GFF6156
phage phage_bap4 -0.3 -0.1 N.D. -0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.3 N.D. +0.0 -0.2
phage phage_bap4 -0.2 +0.0 N.D. -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.3 N.D. +0.0 -0.7
complex community Community=arabino-guar; Passage=4 -0.2 +0.2 N.D. -0.2 -0.4
complex community Community=Kojac gum; Passage=1 -0.1 +0.0 N.D. -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 N.D. +0.0 -0.3
phage phage_bap4 -0.2 +0.0 N.D. +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 N.D. +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 N.D. +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.1 N.D. +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.2 N.D. +0.1 -0.2
phage phage_bap4 -0.0 +0.3 N.D. +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 N.D. +0.1 -0.5
complex community Community=guar; Passage=4 +0.5 +0.5 N.D. -0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 N.D. +0.1 -0.1
complex community Community=guar; Passage=4 -0.0 +0.2 N.D. -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 +0.4 -0.5 N.D. +0.0 +0.5
no phage control no phage control +0.1 +0.3 N.D. +0.1 -0.1
phage phage_bap4 +0.0 +0.2 N.D. +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 N.D. +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 N.D. +0.0 +0.4
complex community Community=Kojac gum; Passage=4 -0.3 +0.4 N.D. +0.0 +0.5
complex community Community=Locust bean gum; Passage=4 +0.7 -0.7 N.D. -0.1 +0.8
complex community Community=arabino-guar; Passage=4 +0.1 +0.5 N.D. -0.3 +0.3
complex community Community=arabino-guar; Passage=4 -0.0 +0.6 N.D. -0.0 +0.3
complex community Community=guar; Passage=4 -0.1 +0.4 N.D. +0.1 +0.5
complex community Community=guar; Passage=4 +0.1 +0.4 N.D. -0.5 +1.1
complex community Community=Locust bean gum; Passage=4 +0.4 +0.2 N.D. +0.3 +0.9
complex community Community=arabino-guar; Passage=4 +0.2 +0.9 N.D. -0.0 +1.1
remove
GFF6152
plot		 remove
GFF6153
plot		 remove
GFF6154		 remove
GFF6155
plot		 remove
GFF6156
plot