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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6148 and GFF6149 are separated by 38 nucleotides
GFF6149 and GFF6150 are separated by 21 nucleotides
GFF6150 and GFF6151 are separated by 105 nucleotides
GFF6151 and GFF6152 are separated by 92 nucleotides
GFF6148 - hypothetical protein, at 52,966 to 53,532
GFF6148
GFF6149 - FAD-dependent oxidoreductase, at 53,571 to 54,959
GFF6149
GFF6150 - Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18), at 54,981 to 56,336
GFF6150
GFF6151 - Transcriptional regulator, LysR family, at 56,442 to 57,404
GFF6151
GFF6152 - hypothetical protein, at 57,497 to 57,874
GFF6152
Group
Condition
GFF6148
GFF6149
GFF6150
GFF6151
GFF6152
complex community
Community=Locust bean gum; Passage=4
-0.9
+0.6
-3.4
-3.2
+0.4
complex community
Community=guar; Passage=4
-1.1
+0.6
-3.6
-2.5
+0.5
complex community
Community=guar; Passage=4
-0.5
+0.1
-3.2
-2.4
+0.1
complex community
Community=arabino-guar; Passage=4
+1.0
+0.1
-3.1
-3.5
+0.1
complex community
Community=Kojac gum; Passage=4
-0.4
+0.2
-2.2
-2.6
-0.3
complex community
Community=Locust bean gum; Passage=4
+1.6
-0.2
-3.8
-2.8
-0.0
complex community
Community=Locust bean gum; Passage=4
+0.7
-0.2
-2.8
-3.0
+0.4
complex community
Community=guar; Passage=4
+1.1
+0.6
-3.3
-3.3
-0.0
complex community
Community=arabino-guar; Passage=4
-0.3
+0.6
-2.6
-2.1
-0.2
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.3
-2.4
-3.1
+0.7
complex community
Community=arabino-guar; Passage=4
+1.2
-0.2
-2.7
-2.6
-0.0
complex community
Community=guar; Passage=4
+0.9
+0.6
-2.2
-3.3
-0.1
complex community
Community=arabino-guar; Passage=4
+0.8
+0.5
-2.4
-3.0
+0.2
phage
phage_bap4
-0.6
-0.1
-0.1
-0.0
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.5
-0.1
+0.1
+0.1
-0.2
no phage control
no phage control
-0.7
+0.1
+0.1
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.5
+0.1
+0.4
+0.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
+0.0
+0.3
+0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.3
-0.1
+0.3
+0.4
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
-0.0
+0.2
+0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.2
+0.3
+0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.0
+0.4
+0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.3
+0.4
+0.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.2
+0.4
+0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.1
+0.3
+0.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.2
+0.2
+0.4
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.5
+0.2
+0.2
+0.1
-0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.7
+0.2
-0.0
-0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.5
+0.1
+0.3
+0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.1
+0.4
+0.3
+0.2
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