Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6124 and GFF6125 overlap by 4 nucleotidesGFF6125 and GFF6126 are separated by 55 nucleotidesGFF6126 and GFF6127 are separated by 59 nucleotidesGFF6127 and GFF6128 are separated by 228 nucleotides GFF6124 - Predicted zinc-binding protein, at 25,608 to 26,186 GFF6124 GFF6125 - Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1), at 26,183 to 27,091 GFF6125 GFF6126 - putative membrane protein, at 27,147 to 28,079 GFF6126 GFF6127 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 28,139 to 29,281 GFF6127 GFF6128 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 29,510 to 29,776 GFF6128
Group Condition GFF6124 GFF6125 GFF6126 GFF6127 GFF6128
complex community Community=Locust bean gum; Passage=4 N.D. +0.6 -0.0 -3.7 -2.2
complex community Community=Kojac gum; Passage=4 N.D. +0.6 -0.4 -3.1 -2.0
complex community Community=arabino-guar; Passage=4 N.D. +0.3 -0.3 -3.6 -1.1
complex community Community=guar; Passage=4 N.D. +0.3 +0.2 -2.9 -2.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.1 -3.1 -1.1
complex community Community=arabino-guar; Passage=4 N.D. +0.5 +0.3 -2.9 -2.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.6 -0.3 -3.0 -1.5
complex community Community=guar; Passage=4 N.D. +0.1 -0.2 -2.7 -0.7
complex community Community=guar; Passage=4 N.D. +0.2 -0.1 -2.2 -1.2
complex community Community=guar; Passage=4 N.D. -0.1 +0.0 -2.1 -1.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 +0.1 -3.1 +0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.3 -2.7 +0.4
complex community Community=arabino-guar; Passage=4 N.D. +0.4 +0.1 -3.7 +1.3
no phage control no phage control N.D. +0.1 +0.0 -0.2 -1.6
phage phage_bap4 N.D. +0.0 -0.1 -0.0 -1.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 +0.1 -0.2 -1.5
phage phage_bap4 N.D. -0.2 -0.0 -0.2 -1.2
phage phage_bap4 N.D. -0.1 -0.0 -0.2 -0.8
phage phage_bap4 N.D. -0.2 -0.1 -0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 +0.0 -0.0 -0.7
no phage control no phage control N.D. +0.2 +0.1 -0.2 -0.7
phage phage_bap4 N.D. +0.1 -0.3 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.1 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.2 +0.2 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.1 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.2 +0.1 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 +0.3 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 +0.1 +0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 +0.1 +0.3 +0.5
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.1 +0.2 +0.6
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