Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF59 and GFF60 are separated by 66 nucleotidesGFF60 and GFF61 overlap by 8 nucleotidesGFF61 and GFF62 are separated by 16 nucleotidesGFF62 and GFF63 are separated by 7 nucleotides GFF59 - Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6), at 75,227 to 75,928 GFF59 GFF60 - GDP-L-fucose synthetase (EC 1.1.1.271), at 75,995 to 76,942 GFF60 GFF61 - GDP-mannose 4,6-dehydratase (EC 4.2.1.47), at 76,935 to 78,059 GFF61 GFF62 - hypothetical protein, at 78,076 to 79,422 GFF62 GFF63 - Putative glycosyltransferase, at 79,430 to 80,512 GFF63
Group Condition GFF59 GFF60 GFF61 GFF62 GFF63
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.8 -0.4 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.2 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 +0.1 -0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 -0.1 -0.3 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 -0.0 -0.6 +0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 -0.1 -0.5 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.2 -0.1 -0.3 +0.1
complex community Community=guar; Passage=4 -0.1 -0.2 +0.3 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 +0.3 -0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 +0.1 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.1 +0.1 -0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.5 +0.1 -0.3 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.3 +0.1 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.0 -0.1 +0.4 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.2 +0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.2 +0.2 -0.0 +0.0
phage phage_bap4 -0.2 +0.2 +0.1 +0.4 +0.1
complex community Community=guar; Passage=4 -0.0 -0.1 +0.5 +0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.2 -0.1 +0.2 +0.6
phage phage_bap4 -0.1 +0.2 +0.1 +0.3 +0.1
phage phage_bap4 +0.1 +0.3 +0.3 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 +0.3 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 +0.2 +0.2 +0.3
no phage control no phage control +0.2 +0.1 +0.1 +0.4 -0.0
complex community Community=guar; Passage=4 +0.1 +0.5 +0.2 -0.1 +0.2
phage phage_bap4 +0.1 -0.1 +0.2 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.5 +0.4 +0.3 -0.4
phage phage_bap4 +0.1 +0.0 +0.5 +0.4 +0.0
complex community Community=arabino-guar; Passage=4 +0.4 +0.4 -0.1 +0.6 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.7 +0.2 +0.4 +0.0
remove
GFF59
plot		 remove
GFF60
plot		 remove
GFF61		 remove
GFF62
plot		 remove
GFF63
plot