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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Number of genes on each side:
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF607 and GFF608 are separated by 3 nucleotides
GFF608 and GFF609 are separated by 134 nucleotides
GFF609 and GFF610 overlap by 4 nucleotides
GFF610 and GFF611 are separated by 14 nucleotides
GFF607 - hypothetical protein, at 607,840 to 608,163
GFF607
GFF608 - hypothetical protein, at 608,167 to 609,405
GFF608
GFF609 - Carbon starvation protein A, at 609,540 to 611,588
GFF609
GFF610 - Uncharacterized proteins YbdD and YjiX, at 611,585 to 611,770
GFF610
GFF611 - Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family, at 611,785 to 612,702
GFF611
Group
Condition
GFF607
GFF608
GFF609
GFF610
GFF611
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.0
+0.1
-2.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.1
-0.7
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.2
+0.1
-1.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
+0.0
+0.0
-0.8
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.0
-0.8
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
+0.2
+0.1
-0.5
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.0
+0.1
-0.7
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.2
+0.1
-0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.1
-0.1
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.1
-1.0
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
+0.0
-0.3
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.2
+0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.2
-0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.0
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
+0.1
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.0
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.1
+0.1
+0.2
+0.2
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