Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF6051 and GFF6052 overlap by 4 nucleotidesGFF6052 and GFF6053 are separated by 166 nucleotidesGFF6053 and GFF6054 are separated by 133 nucleotidesGFF6054 and GFF6055 overlap by 1 nucleotides GFF6051 - Enoyl-CoA hydratase (EC 4.2.1.17), at 111,614 to 112,408 GFF6051 GFF6052 - HNH endonuclease family protein, at 112,405 to 112,965 GFF6052 GFF6053 - FMN adenylyltransferase (EC 2.7.7.2) / Riboflavin kinase (EC 2.7.1.26), at 113,132 to 114,169 GFF6053 GFF6054 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 114,303 to 117,152 GFF6054 GFF6055 - Lipoprotein signal peptidase (EC 3.4.23.36), at 117,152 to 117,664 GFF6055
Group Condition GFF6051 GFF6052 GFF6053 GFF6054 GFF6055
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 -0.0 N.D. N.D. N.D.
no phage control no phage control -0.1 -0.2 N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=4 -0.2 -0.1 N.D. N.D. N.D.
phage phage_bap4 -0.1 -0.2 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.0 N.D. N.D. N.D.
phage phage_bap4 -0.1 -0.1 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.5 +0.3 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -0.2 +0.1 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 N.D. N.D. N.D.
no phage control no phage control -0.1 +0.1 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.4 +0.4 N.D. N.D. N.D.
phage phage_bap4 +0.2 -0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.1 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -0.0 +0.2 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -0.2 +0.4 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.0 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -0.1 +0.4 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.3 N.D. N.D. N.D.
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